PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIM97961.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 192aa MW: 21876.2 Da PI: 4.5858 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 117.7 | 1.1e-36 | 9 | 128 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGf+F Ptdeelvv++L++k++ +++ +vi+++d+y ++PwdL+ k+ +e ++wyf+s+r + +r+t sgyW++ g +++++s+ +g+ PIM97961.1 9 LPPGFHFYPTDEELVVHFLHRKAALLPCDP-DVIPDLDLYPYDPWDLDGKAMGEGNKWYFYSRRTQ--------SRITGSGYWQSIGVEEPIYSSgGGQ 98 79*************************999.99**************977778899******9854........799*****************98889 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk +fy g+ ++g+kt+W+m+eyrl PIM97961.1 99 KVGMKKYNAFYIGEPSQGVKTNWIMQEYRL 128 9***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 192 aa Download sequence |
MGDHNSLNLP PGFHFYPTDE ELVVHFLHRK AALLPCDPDV IPDLDLYPYD PWDLDGKAMG 60 EGNKWYFYSR RTQSRITGSG YWQSIGVEEP IYSSGGGQKV GMKKYNAFYI GEPSQGVKTN 120 WIMQEYRLSD SSSTSRSSSR RRSSKTNDFS KWVICRVYER NCDSDDDGGT ELSCLDEVFL 180 SLDDLDEISL PN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G64530.1 | 7e-70 | NAC family protein |