PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM97475.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NF-X1

Protein Properties

Length: 1098aa MW: 118874 Da PI: 8.0259

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM97475.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	19	3.1e-06	300	318	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H C++ CH GpC+pCp PIM97475.1 300 CGRHHCERVCHVGPCDPCP 318 ******************8 PP
2	zf-NF-X1	18.1	5.9e-06	364	381	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C+++CH+GpC++C PIM97475.1 364 CGNHVCGETCHPGPCGEC 381 ****************** PP
3	zf-NF-X1	18.4	4.7e-06	422	440	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG H Cq CH G+CppC+ PIM97475.1 422 CGLHHCQNVCHSGDCPPCS 440 ******************7 PP
4	zf-NF-X1	17.9	6.6e-06	518	536	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C +lCH G CppC PIM97475.1 518 CGQHSCTSLCHSGHCPPCL 536 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1098 aa Download sequence
MSFSEQNERG ESSNHRPRNN NYSRQHRREW VRRGFAPVIA PVVSSASADN SSQNENGNGG 60 EVVNRSVQPV FLSQNRSHVG SRRNTAQYVS RQEKEEGKGK HKHDGNAKVS KGVNIPQLVQ 120 EIQDKLLKGS VECMICYDMV RRSAPIWSCC SCYSIFHLNC IKKWAKAPSS VDLLAEKNQG 180 SNWRCPGCQS VQLMSAKEIR YVCFCGKRTD PPSDLYLTPH SCGEPCGKPL ERALPGSGMT 240 DEDICPHVCV LQCHPGPCPP CKAFAPPRRC PCGKKTVTTR CSDRKSVLTC GQKCDKLLDC 300 GRHHCERVCH VGPCDPCPVL INASCFCKKK IEIMLCGDMI VKGEFKGEDG VFSCNFTCEN 360 KLNCGNHVCG ETCHPGPCGE CELLPSKIKT CCCGKTILNK DRLSCLDPIP TCTQICDKIL 420 PCGLHHCQNV CHSGDCPPCS ILVTQKCRCG STSRTVECYK TVLENEKFTC DKACGRKKSC 480 GRHRCSERCC PRSNSDGSSL VGWDPHLCSM PCEKKLRCGQ HSCTSLCHSG HCPPCLETIF 540 TDLACACGRT SIPPPLPCGT PPPSCQYPCS VPQPCGHPSS HSCHFGDCPP CSVPIAKECV 600 GGHVVLRNIP CGSKDIRCNK LCGKTRQCGL HACSRTCHPP PCDSSAASST SLRASCGQTC 660 GAPRKDCRHT CSALCHPSTP CPDVRCEVPV TITCSCGRIT ATVPCDAGGS SGGYNVDTLL 720 EASIVQKLPV HLQPAEGNGQ KIPLGQRKLV CDDECAKVER KKVLADAFGV TPPNLDALHF 780 GENASVSEVL SDLLRRDAKW VLSVEERCRY MVLGRGRGGI NALKVHVFCP MSKEKRDAVR 840 LIADRWKLSV NAAGWEPKRF IIVHVTSKSK APARMLGFKS CNPGNMLQPP IFDPLIDMDP 900 RLVVALFDLP READVSALVL RFGGECELVW LNDKNALAVF SDPGRAATAM RRLDQGSVYH 960 GAIAVPQSGG AALAVHSGSG PSAWGSAAAS KDAAALKANP WKKVVLQNSE SSESSWDAEE 1020 WSPNASDSKL PARSEKEAPI SASSNRWSLL QSGSTSKSSD ENLQKQPENP SVSDLNSKES 1080 VSNGMSGDVA DDWEEACD

Sequence ? help Back to Top

Protein Sequence Length: 1098 aa Download sequence

MSFSEQNERG ESSNHRPRNN NYSRQHRREW VRRGFAPVIA PVVSSASADN SSQNENGNGG  60
EVVNRSVQPV FLSQNRSHVG SRRNTAQYVS RQEKEEGKGK HKHDGNAKVS KGVNIPQLVQ  120
EIQDKLLKGS VECMICYDMV RRSAPIWSCC SCYSIFHLNC IKKWAKAPSS VDLLAEKNQG  180
SNWRCPGCQS VQLMSAKEIR YVCFCGKRTD PPSDLYLTPH SCGEPCGKPL ERALPGSGMT  240
DEDICPHVCV LQCHPGPCPP CKAFAPPRRC PCGKKTVTTR CSDRKSVLTC GQKCDKLLDC  300
GRHHCERVCH VGPCDPCPVL INASCFCKKK IEIMLCGDMI VKGEFKGEDG VFSCNFTCEN  360
KLNCGNHVCG ETCHPGPCGE CELLPSKIKT CCCGKTILNK DRLSCLDPIP TCTQICDKIL  420
PCGLHHCQNV CHSGDCPPCS ILVTQKCRCG STSRTVECYK TVLENEKFTC DKACGRKKSC  480
GRHRCSERCC PRSNSDGSSL VGWDPHLCSM PCEKKLRCGQ HSCTSLCHSG HCPPCLETIF  540
TDLACACGRT SIPPPLPCGT PPPSCQYPCS VPQPCGHPSS HSCHFGDCPP CSVPIAKECV  600
GGHVVLRNIP CGSKDIRCNK LCGKTRQCGL HACSRTCHPP PCDSSAASST SLRASCGQTC  660
GAPRKDCRHT CSALCHPSTP CPDVRCEVPV TITCSCGRIT ATVPCDAGGS SGGYNVDTLL  720
EASIVQKLPV HLQPAEGNGQ KIPLGQRKLV CDDECAKVER KKVLADAFGV TPPNLDALHF  780
GENASVSEVL SDLLRRDAKW VLSVEERCRY MVLGRGRGGI NALKVHVFCP MSKEKRDAVR  840
LIADRWKLSV NAAGWEPKRF IIVHVTSKSK APARMLGFKS CNPGNMLQPP IFDPLIDMDP  900
RLVVALFDLP READVSALVL RFGGECELVW LNDKNALAVF SDPGRAATAM RRLDQGSVYH  960
GAIAVPQSGG AALAVHSGSG PSAWGSAAAS KDAAALKANP WKKVVLQNSE SSESSWDAEE  1020
WSPNASDSKL PARSEKEAPI SASSNRWSLL QSGSTSKSSD ENLQKQPENP SVSDLNSKES  1080
VSNGMSGDVA DDWEEACD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein