PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM97404.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 333aa MW: 37765.9 Da PI: 6.1459 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.9 | 1.4e-51 | 15 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s + PIM97404.1 15 VPPGFRFHPTEEELLQYYLRKKVAYEKIDL-DVIRDVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYS-N 111 69****************************.9***************964444222455**************************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ktLvfy grap+g+k+dW+mheyrl PIM97404.1 112 CKRIGMRKTLVFYGGRAPHGQKSDWIMHEYRL 143 889***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MSENMNLSVN GHSQVPPGFR FHPTEEELLQ YYLRKKVAYE KIDLDVIRDV DLNKLEPWDI 60 QEKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIYS NCKRIGMRKT 120 LVFYGGRAPH GQKSDWIMHE YRLDDNSNHA PNIGTVDSGP EEGWVVCRVF KKKNYHKTSS 180 DHHPATSSRN NDNILDQILM CIGRSSSTST FKQEDHEEFP NTAPDFAHLP DLEIPAVKSP 240 TNDIITEMAP SNSEPCDWVA LDRLVASQLN GSETVNHEDF SFSFDHDDQV QLMNMANGPG 300 RPNTDMDFWS FARTSSSLSL SSSSSDPLSH LSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 1e-105 | NAC family protein |