PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM97397.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 227aa MW: 26541 Da PI: 7.4942 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.3 | 3.5e-20 | 69 | 122 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++++eqle Le+ F+++ +++ +++ +LAk+lgL+ rq+ vWFqNrRa++k PIM97397.1 69 KKKRLSTEQLESLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWK 122 56679************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120.7 | 7.8e-39 | 69 | 159 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kk+rls+eq+++LE+sF+ee kL+p+rK++la+eLglqprq+avWFqnrRAR+k kqlE+ y+aLk++yd +++e+++L++ev +Lr+ lk PIM97397.1 69 KKKRLSTEQLESLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWKGKQLERLYDALKQEYDVVSREKHKLQQEVLALRTILK 159 9*************************************************************************************98776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MDWNGNFRVP FVSRPEINSF SFLYSYNNYD HQLTGLEMKQ PSMQASAMVP TLMDHKNNNN 60 MNIYGPDTKK KRLSTEQLES LENSFQEEIK LDPDRKMKLA KELGLQPRQI AVWFQNRRAR 120 WKGKQLERLY DALKQEYDVV SREKHKLQQE VLALRTILKD QMTKKQVSNG YTEVSGEETV 180 ESTSIPSSDK PNNINNQIAE CNYVLNMDDY NQVMMTPYNW ATLPSCP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 69 | 98 | KKKRLSTEQLESLENSFQEEIKLDPDRKMK |
2 | 117 | 125 | RRARWKGKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 7e-50 | HD-ZIP family protein |