PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIM97357.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 177aa MW: 20883.3 Da PI: 6.8797 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 154.1 | 6.4e-48 | 6 | 135 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 +GfrF+Pt+eelv++yL++k++g++ ++++vi+ vdiy+++Pw+Lp+ ++++++++w+fF++r++++a+g r+nr tk+gyWkatg+ ev+s+++ PIM97357.1 6 VGFRFRPTEEELVSYYLREKLKGTTPDIDRVIPVVDIYNYNPWELPQlageRCHGDTEQWFFFTPRQEREARGGRPNRLTKEGYWKATGSPGEVYSSQN 104 7***************************99***************9656766666888***************************************** PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +g kkt+vfy+grap+g+kt+W m+ey++ PIM97357.1 105 QRIGRKKTMVFYEGRAPHGRKTSWKMNEYKV 135 *****************************86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 177 aa Download sequence |
MNDLGVGFRF RPTEEELVSY YLREKLKGTT PDIDRVIPVV DIYNYNPWEL PQLAGERCHG 60 DTEQWFFFTP RQEREARGGR PNRLTKEGYW KATGSPGEVY SSQNQRIGRK KTMVFYEGRA 120 PHGRKTSWKM NEYKVFDNYD HEHAGADPQY LKATECYMSD DEFGHHHMYG IVYCFSM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22380.1 | 4e-63 | NAC family protein |