PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692812.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GRF

Protein Properties

Length: 430aa MW: 46254.3 Da PI: 9.9746

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	73.2	2.9e-23	87	130	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRC+++v++g+k+CErH+hrg++rs+ ++e XP_021692812.1 87 DPEPGRCRRTDGKKWRCKKTVVSGQKYCERHMHRGCQRSKMTVE 130 79*************************************98887 PP
2	WRC	59.5	5.4e-19	310	348	2	40
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsr 40 epgrCrRtDGKkWRC+r+v++ +k+C H+hrg +++ XP_021692812.1 310 VEPGRCRRTDGKKWRCRRDVVPSEKYCKMHMHRGAKKRV 348 59********************************87765 PP
3	QLQ	43.3	1.1e-15	22	56	3	37
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +TaaQl++L Q+++yKy+aa++PvP+ L+++ ++ XP_021692812.1 22 LTAAQLAELQLQVMIYKYIAAGLPVPSALVLPTWN 56 8*****************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MKLCSGIGDD RGPVIKRWKS QLTAAQLAEL QLQVMIYKYI AAGLPVPSAL VLPTWNSVAS 60 SFGFVNGLNP SFVGFSPQAF DYRNMMDPEP GRCRRTDGKK WRCKKTVVSG QKYCERHMHR 120 GCQRSKMTVE VTASNATPLN NSSKTSQNSG TSGSSPIPAT LSSNHKNYGM ACSNVDAKTT 180 GTTKAAFVVS CPKSINTSLN PRGIAGCINA TAIMITSTVP TDSTITTATV GTNKGGSNNN 240 HKTKTIADRN VNCSNNVSLK NLIDGANNSR NITNTKGVAY QGLNFSPNSV LQVQNCGTAP 300 TCLYRSYVDV EPGRCRRTDG KKWRCRRDVV PSEKYCKMHM HRGAKKRVEA SQSSALLNAN 360 PEIISTTSSC LLPTAIFPKK GSINLNTNLS ISITANPQLD NTTDTNISNN SETTISNTLI 420 ASCEDGDLSS

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MKLCSGIGDD RGPVIKRWKS QLTAAQLAEL QLQVMIYKYI AAGLPVPSAL VLPTWNSVAS  60
SFGFVNGLNP SFVGFSPQAF DYRNMMDPEP GRCRRTDGKK WRCKKTVVSG QKYCERHMHR  120
GCQRSKMTVE VTASNATPLN NSSKTSQNSG TSGSSPIPAT LSSNHKNYGM ACSNVDAKTT  180
GTTKAAFVVS CPKSINTSLN PRGIAGCINA TAIMITSTVP TDSTITTATV GTNKGGSNNN  240
HKTKTIADRN VNCSNNVSLK NLIDGANNSR NITNTKGVAY QGLNFSPNSV LQVQNCGTAP  300
TCLYRSYVDV EPGRCRRTDG KKWRCRRDVV PSEKYCKMHM HRGAKKRVEA SQSSALLNAN  360
PEIISTTSSC LLPTAIFPKK GSINLNTNLS ISITANPQLD NTTDTNISNN SETTISNTLI  420
ASCEDGDLSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36400.1	6e-26	GRF family protein