PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692643.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

E2F/DP

Protein Properties

Length: 453aa MW: 50608.9 Da PI: 6.6764

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692643.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	82.9	2.7e-26	182	247	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+ll++kf+kl++++++ +++ln a+ L +v ++RRiYDi+NVLe++ liek++kn+irwkg XP_021692643.1 182 RYDSSLGLLSKKFVKLIQEAKDCTLDLNRTADVL---EV--QKRRIYDITNVLEGIALIEKTSKNHIRWKG 247 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MPTQIPSIAC IFPSALQTLP LFLFSSTLMA SWNEDPTSTP QPSQFHFHLQ NQSQSSPSTS 60 TPEIENPLFF SSLRKPHHPL SSSLPPSNTP LAFQLHAANT HSAFAKLELK QNNEKYNHET 120 KYSGQATIPT RSKLVAGHTL GPSSAAGSER NNRSKAPKNG KLGIQRSNSE SLNGVNPATG 180 CRYDSSLGLL SKKFVKLIQE AKDCTLDLNR TADVLEVQKR RIYDITNVLE GIALIEKTSK 240 NHIRWKGYDG CGPEEFDNHV NRLKADVESL HAEECRVDES IREKQELLRA LEEEENKKRH 300 LFLMEGDITS LPCFQNQMLI AIKAPQASYL EVSDPNGNIG PPQYKMIVRS NTGPIDLYLL 360 SKYKKQDEDV AVKQVKPLNP SAQKCGPHRM ETEGPSLEPQ HHKNNVAEMF SLPYSEESGI 420 QKIIPSDYDI GDDYWFQSNP EVSISELWGT SSN

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MPTQIPSIAC IFPSALQTLP LFLFSSTLMA SWNEDPTSTP QPSQFHFHLQ NQSQSSPSTS  60
TPEIENPLFF SSLRKPHHPL SSSLPPSNTP LAFQLHAANT HSAFAKLELK QNNEKYNHET  120
KYSGQATIPT RSKLVAGHTL GPSSAAGSER NNRSKAPKNG KLGIQRSNSE SLNGVNPATG  180
CRYDSSLGLL SKKFVKLIQE AKDCTLDLNR TADVLEVQKR RIYDITNVLE GIALIEKTSK  240
NHIRWKGYDG CGPEEFDNHV NRLKADVESL HAEECRVDES IREKQELLRA LEEEENKKRH  300
LFLMEGDITS LPCFQNQMLI AIKAPQASYL EVSDPNGNIG PPQYKMIVRS NTGPIDLYLL  360
SKYKKQDEDV AVKQVKPLNP SAQKCGPHRM ETEGPSLEPQ HHKNNVAEMF SLPYSEESGI  420
QKIIPSDYDI GDDYWFQSNP EVSISELWGT SSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.1	4e-96	E2F/DP family protein