PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021692610.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family BBR-BPC
Protein Properties Length: 338aa    MW: 37633.5 Da    PI: 9.833
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021692610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind391.99.4e-12013381301
       GAGA_bind   1 mdddgsre..rnkg.yye........pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnklla 83 
                     mdd g+re  r+k+ +y+        +a +s+k     q+m+++aerda+i+ern+a+sekkaa+aerdmaflqrd+a+aern+a++erdn+++a
  XP_021692610.1   1 MDDGGHREngRHKAdQYKtaqgqwliQAqPSMK-----QIMAIMAERDAAIHERNMAISEKKAAIAERDMAFLQRDSAIAERNNAIMERDNAIAA 90 
                     9*****999*****9***666555552224555.....********************************************************* PP

       GAGA_bind  84 lllvensla..salpvgvqvlsgtksidslqqlse..pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkkseks 174
                     l+++ens+a  ++++   + ++g+k++++ qq+ +  p+ ++ ++++re++++++lp++    + +e++k+++++r+k++k  k   ++kk++ks
  XP_021692610.1  91 LQYRENSMAsaNVSSCPPGFSRGVKHMHHPQQHAHhvPHSNEASYGTREMQTNDTLPMSP---VGSEAAKSRRGKRSKDAKDAKVMPPNKKTSKS 182
                     *******99553344455789***********65558999*****************665...55555566666788888888888888888899 PP

       GAGA_bind 175 kkkvkkesad.er............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiS 240
                      +kvk+e++d ++                            sk+++k +dl+ln++++Dest+P+PvCsCtG+ rqCYkWG+GGWqS+CCtt++S
  XP_021692610.1 183 PRKVKRENEDlDKimfgkshewkneqdmagegddlnkqlvaSKSDWKGQDLGLNQIAFDESTMPAPVCSCTGVFRQCYKWGSGGWQSSCCTTALS 277
                     999999999855599******************************************************************************** PP

       GAGA_bind 241 vyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     +yPLP+++++r+aR++grKmS++af+klL++LaaeGydlsnpvDLkdhWAkHGtn+++ti+
  XP_021692610.1 278 MYPLPAVPNKRHARVGGRKMSGSAFSKLLSRLAAEGYDLSNPVDLKDHWAKHGTNRYITIK 338
                     ************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MDDGGHRENG RHKADQYKTA QGQWLIQAQP SMKQIMAIMA ERDAAIHERN MAISEKKAAI  60
AERDMAFLQR DSAIAERNNA IMERDNAIAA LQYRENSMAS ANVSSCPPGF SRGVKHMHHP  120
QQHAHHVPHS NEASYGTREM QTNDTLPMSP VGSEAAKSRR GKRSKDAKDA KVMPPNKKTS  180
KSPRKVKREN EDLDKIMFGK SHEWKNEQDM AGEGDDLNKQ LVASKSDWKG QDLGLNQIAF  240
DESTMPAPVC SCTGVFRQCY KWGSGGWQSS CCTTALSMYP LPAVPNKRHA RVGGRKMSGS  300
AFSKLLSRLA AEGYDLSNPV DLKDHWAKHG TNRYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-159BBR-BPC family protein