PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692574.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GeBP

Protein Properties

Length: 389aa MW: 43740.5 Da PI: 4.9078

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	121.2	5.2e-38	139	233	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +qrlwse+Dei++L Gl ++k+++g++p++d+ +f+ef+kks++++vsk+ql++KirrLKkK++++ ++ ++g++p+fsk+hd k+felskk+W+ XP_021692574.1 139 IQRLWSEDDEIAILNGLSQYKSEKGADPYADMGDFHEFIKKSLHVDVSKNQLIDKIRRLKKKYQNNLERGENGRDPVFSKSHDVKSFELSKKFWD 233 79********************************************************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MAIKRVSENP PPASSEEEEE EEDDSTEEND SVVYEQNDVA DVKEDDDEGP QESPVLNKSA 60 VPATPPKSSS ATESDSESTQ PSLSPSAFTI KLHKRTSKPN KSVLKRPADS DIIAWERPSK 120 KNKATGGGDE EEVKKGSVIQ RLWSEDDEIA ILNGLSQYKS EKGADPYADM GDFHEFIKKS 180 LHVDVSKNQL IDKIRRLKKK YQNNLERGEN GRDPVFSKSH DVKSFELSKK FWDGGKSNEK 240 NDSVNRSGKV NSSNGGGCGG VTLALANQRK GNQLRPRKEM QAPNRQVKIE ENHQVKGDEK 300 MQEKGEDAEE ELWETYPFLS ESLEMDCFSE GVKVILRQQM GMIEKGKLKE LEDKWKRLKQ 360 AELELFVQRM ELAHEQVKLS LDSIKSGES

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MAIKRVSENP PPASSEEEEE EEDDSTEEND SVVYEQNDVA DVKEDDDEGP QESPVLNKSA  60
VPATPPKSSS ATESDSESTQ PSLSPSAFTI KLHKRTSKPN KSVLKRPADS DIIAWERPSK  120
KNKATGGGDE EEVKKGSVIQ RLWSEDDEIA ILNGLSQYKS EKGADPYADM GDFHEFIKKS  180
LHVDVSKNQL IDKIRRLKKK YQNNLERGEN GRDPVFSKSH DVKSFELSKK FWDGGKSNEK  240
NDSVNRSGKV NSSNGGGCGG VTLALANQRK GNQLRPRKEM QAPNRQVKIE ENHQVKGDEK  300
MQEKGEDAEE ELWETYPFLS ESLEMDCFSE GVKVILRQQM GMIEKGKLKE LEDKWKRLKQ  360
AELELFVQRM ELAHEQVKLS LDSIKSGES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	1e-28	GeBP family protein