PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692404.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 350aa MW: 39119.2 Da PI: 7.0753

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692404.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.3	2.4e-12	174	220	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq XP_021692404.1 174 DHVIAERKRREKLSQRFIALSAVVPGL-----KKMDKASVLGDAIKYLKHLQ 220 6999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MEISSAKWLS ELGVEDPAFN YQYQMNPLDY PIDDLDFQFS PKSYLTNDQI FNPQTVQNFS 60 CALNEKPQTS NERPRKQLKT NSWNSCTTEQ ITSKPPPSSS SHIISFQNSN SSAATSQQLN 120 GLDPTTVKPK NEMGSNGSIN YPSSLFCQGS FEEYGQGTQK KTGPLSRSPL HAQDHVIAER 180 KRREKLSQRF IALSAVVPGL KKMDKASVLG DAIKYLKHLQ GRVKTLEEQA AKKTMESVVF 240 VKKSQVYVDD ESSSTDENSD GCCDQPLPEI EARVSDKDVL IRVHCEKQKG CLLKILSELE 300 KLHLNVINSS VLPFGNSTLD VTIVAQMDGD FSITVKDLVR NLRQALLKYM

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MEISSAKWLS ELGVEDPAFN YQYQMNPLDY PIDDLDFQFS PKSYLTNDQI FNPQTVQNFS  60
CALNEKPQTS NERPRKQLKT NSWNSCTTEQ ITSKPPPSSS SHIISFQNSN SSAATSQQLN  120
GLDPTTVKPK NEMGSNGSIN YPSSLFCQGS FEEYGQGTQK KTGPLSRSPL HAQDHVIAER  180
KRREKLSQRF IALSAVVPGL KKMDKASVLG DAIKYLKHLQ GRVKTLEEQA AKKTMESVVF  240
VKKSQVYVDD ESSSTDENSD GCCDQPLPEI EARVSDKDVL IRVHCEKQKG CLLKILSELE  300
KLHLNVINSS VLPFGNSTLD VTIVAQMDGD FSITVKDLVR NLRQALLKYM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	184	ERKRRE
2	180	185	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	4e-69	bHLH family protein