PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021692254.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 273aa MW: 31695.8 Da PI: 10.1 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.3 | 3.1e-31 | 52 | 101 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ XP_021692254.1 52 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 101 79***********************************************8 PP | |||||||
2 | K-box | 110.3 | 2e-36 | 120 | 216 | 4 | 100 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 s+ s++ea+++ +qqe++kL+++i+++q+ +Rh+lGe L++LslkeL++Le++Lek++++iRskKne+l+++ie++qk+e elq++n+ Lr+k+ XP_021692254.1 120 SNPASASEANTQFYQQESSKLRRQIREIQNLNRHILGEALGTLSLKELKNLESRLEKGISRIRSKKNEMLFAEIEYMQKREIELQNDNMFLRAKI 214 3444599***************************************************************************************9 PP K-box 99 ee 100 +e XP_021692254.1 215 AE 216 86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MKKYNSFSNT KQSVYVSEQK PKSNLTTLEF PNQEPDQGPS LRKTGRGKIE IKRIENTTNR 60 QVTFCKRRNG LLKKAYELSV LCDAEVALIV FSTRGRLYEY ANNSVRATIE RYKKANADSS 120 NPASASEANT QFYQQESSKL RRQIREIQNL NRHILGEALG TLSLKELKNL ESRLEKGISR 180 IRSKKNEMLF AEIEYMQKRE IELQNDNMFL RAKIAENERA QQQQQQQQTN LMPSGSVYES 240 VPSQQYDRNF FPVNLLEPNH HYSRPDHTAL QLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42830.1 | 1e-113 | MIKC_MADS family protein |