PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021691809.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 596aa MW: 65033.7 Da PI: 8.7593

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021691809.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	71	93	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_021691809.1 71 FICEVCNKGFQREQNLQLHRRGH 93 89*******************88 PP
2	zf-C2H2	13.1	0.00029	147	169	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_021691809.1 147 WKCEKCSKRYAVQSDWKAHSKTC 169 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MAASSSSVPF FGISDEDHQN QMKQHHSSTP TSSSAPAPPP QKKKRNQPGT PNPDAEVIAL 60 SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTTKEVKRK VYLCPEPTCV 120 HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT 180 LFSRRDSFIT HRAFCDALAQ ESARNPPSTL NTIGSHLYGG SNMSLGLSQV GTQISSMQDQ 240 SSDVLRLGGC GRIGQFDHLL PPSMGSSSFR PPQQMHSSAF FMQESNQNYH EDHQSQQGLL 300 QNKSFHHGLM QFADLHNTAS NNPPPPASNI FNLSFISSSS TTSNIANSNN ANNSNSNLPS 360 SGLLMPNHFN SQNGASGGGE ESSIFSNNIM GDHPHHHHHH HQQMTSGVPS LFSSSVQNDN 420 MVPHMSATAL LQKAAQMGST SSTNSASLLR SFGSSSSSGI KSDRPLVSAN FGGLFNENDN 480 NLHDLMNSFA TGNSSLFASG HGQENPHSGN MDEAKLHQGL NMSIGGSDRL TRDFLGVGQI 540 VRSMSGGFSR RENHQQQQQQ QEAAPQPGID MSSSLDSERN ITAQTGQSFG GNGNFQ

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MAASSSSVPF FGISDEDHQN QMKQHHSSTP TSSSAPAPPP QKKKRNQPGT PNPDAEVIAL  60
SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTTKEVKRK VYLCPEPTCV  120
HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT  180
LFSRRDSFIT HRAFCDALAQ ESARNPPSTL NTIGSHLYGG SNMSLGLSQV GTQISSMQDQ  240
SSDVLRLGGC GRIGQFDHLL PPSMGSSSFR PPQQMHSSAF FMQESNQNYH EDHQSQQGLL  300
QNKSFHHGLM QFADLHNTAS NNPPPPASNI FNLSFISSSS TTSNIANSNN ANNSNSNLPS  360
SGLLMPNHFN SQNGASGGGE ESSIFSNNIM GDHPHHHHHH HQQMTSGVPS LFSSSVQNDN  420
MVPHMSATAL LQKAAQMGST SSTNSASLLR SFGSSSSSGI KSDRPLVSAN FGGLFNENDN  480
NLHDLMNSFA TGNSSLFASG HGQENPHSGN MDEAKLHQGL NMSIGGSDRL TRDFLGVGQI  540
VRSMSGGFSR RENHQQQQQQ QEAAPQPGID MSSSLDSERN ITAQTGQSFG GNGNFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	1e-119	C2H2 family protein