PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021691667.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 211aa MW: 22890.2 Da PI: 9.1826 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 95.5 | 5.8e-30 | 2 | 102 | 1 | 96 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlr++C + C+l+ ++ p++q +++ +++k+FG+s +++l++a+pe++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+ XP_021691667.1 2 SCNGCRVLRKGCGETCILRSCLhwispPEAQGNATLFLAKFFGRSDLMSLISAVPESQRPALFQSLLFEACGRTVNPVNGAVGLLWSGNWHVCQA 96 6*************************99999**************************************************************** PP DUF260 91 kaelal 96 ++e++l XP_021691667.1 97 AVETVL 102 *99876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 211 aa Download sequence |
MSCNGCRVLR KGCGETCILR SCLHWISPPE AQGNATLFLA KFFGRSDLMS LISAVPESQR 60 PALFQSLLFE ACGRTVNPVN GAVGLLWSGN WHVCQAAVET VLSGGILRPI PGIHSGVLAP 120 NYDESSSVSF SAEACELRNT WKQSKPYTNM ARENQASVFN LSLPPKLLAS GRAGREKKGR 180 DAVSFYTKES SETTTFKSSG GDRKKLLNLF V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G49940.1 | 2e-66 | LBD family protein |