PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021691222.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 250aa MW: 28190.7 Da PI: 8.7783 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 112 | 4.2e-35 | 17 | 114 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCa+Ck++r+kC +dC+lapyfpa+++++f++vhk+FG+snv+kl+++++ee+r+++++slv+eA +r++dP+ G +g ++k+q++l+ k++ + XP_021691222.1 17 ACASCKHQRKKCGEDCILAPYFPADRSREFQAVHKVFGVSNVMKLVRSVKEEDRKTVADSLVWEAFCRQNDPILGPLGEYRKIQEELKLFKNQSQ 111 7***************************************************************************************9998877 PP DUF260 96 llk 98 ++ XP_021691222.1 112 TQT 114 665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MQRSSSITNS GTVAHPACAS CKHQRKKCGE DCILAPYFPA DRSREFQAVH KVFGVSNVMK 60 LVRSVKEEDR KTVADSLVWE AFCRQNDPIL GPLGEYRKIQ EELKLFKNQS QTQTQILNQN 120 QLVQQPECMM HKATTPGMVA WNNGTNGVNN KGIEGGLANN NNNNNMVNFS HDNGNIIYSS 180 YPLNYVQGPQ KVMKQEKDVN PRLLPLQQPQ QQHHHSVTAG FNHQQQYYLP GQFGYMNGKT 240 MDNTAWEAGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06280.1 | 6e-48 | LBD family protein |