PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021691079.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 679aa MW: 75186.9 Da PI: 6.8989

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021691079.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76	4.2e-24	122	223	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g++W++++iyr++++r++lt+GW++Fv++++L +gD++vF + + XP_021691079.1 122 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFL--RAE 212 89**************************986445444..8999*****************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_021691079.1 213 NGDLCVGIRRA 223 8999**997 PP
2	Auxin_resp	117.2	1.4e-38	275	358	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a++ ++FevvY+Pras++eF+v+++ v++a+++++++GmRfkmafetedss++++ +Gt+++v+ +dp+rWpnS+Wr+L+ XP_021691079.1 275 AATLAANWQPFEVVYYPRASAPEFCVRASAVRTAMQIQWCPGMRFKMAFETEDSSRISWfMGTISSVQVADPIRWPNSPWRLLQ 358 688999****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MIRDFGVMKS QRVAEKCLDS QLWHVCAGGM VRMPPVNSKV IYFPQGHAEH AQGNVDFGHC 60 KIPAMIPCKV SAIKYLADPE TDEVYAKIRL VPLSDRDMVC MEDGRDDGLF DGKASQEKPA 120 SFAKTLTQSD ANNGGGFSVP RYCAETIFPR LDYSAEPPVQ TILAKDVHGE TWKFRHIYRG 180 TPRRHLLTTG WSNFVNQKKL VAGDSIVFLR AENGDLCVGI RRAKREIGGG NEYPSGWNSF 240 GGYSGFLRGD ENKLMKRNGN GDMKGKVMAE SVIQAATLAA NWQPFEVVYY PRASAPEFCV 300 RASAVRTAMQ IQWCPGMRFK MAFETEDSSR ISWFMGTISS VQVADPIRWP NSPWRLLQVS 360 WDEPDLLQNV KRVSPWLVEL VSNMPAIHLS PFSPPRKKLR FPQPPDFSLI SQFPVPSFTG 420 NPLSSNSPLC CVSDNIPAGI QGARHAQFEL STADHFNKLR SGLFPFGFQQ LDQAAPTSRI 480 PSHNFMGINE NNEKISCLLT VGNPTLSSKE NSETKAQHIV LFGQLILTDQ RSSQSFSGDT 540 NGNSSSDGNP EKTANLSDGS VSVFQQNGLQ ENSSDDGSPW YKDHQKTNLG LETGHCKVFL 600 ESEDVGRTLD LSVIGSYEEL YGKLANMFGI ENSDMPSCVL YRDMAGATKH TGDEPFSEFL 660 KTARRLTILT DSGSDNIGR

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MIRDFGVMKS QRVAEKCLDS QLWHVCAGGM VRMPPVNSKV IYFPQGHAEH AQGNVDFGHC  60
KIPAMIPCKV SAIKYLADPE TDEVYAKIRL VPLSDRDMVC MEDGRDDGLF DGKASQEKPA  120
SFAKTLTQSD ANNGGGFSVP RYCAETIFPR LDYSAEPPVQ TILAKDVHGE TWKFRHIYRG  180
TPRRHLLTTG WSNFVNQKKL VAGDSIVFLR AENGDLCVGI RRAKREIGGG NEYPSGWNSF  240
GGYSGFLRGD ENKLMKRNGN GDMKGKVMAE SVIQAATLAA NWQPFEVVYY PRASAPEFCV  300
RASAVRTAMQ IQWCPGMRFK MAFETEDSSR ISWFMGTISS VQVADPIRWP NSPWRLLQVS  360
WDEPDLLQNV KRVSPWLVEL VSNMPAIHLS PFSPPRKKLR FPQPPDFSLI SQFPVPSFTG  420
NPLSSNSPLC CVSDNIPAGI QGARHAQFEL STADHFNKLR SGLFPFGFQQ LDQAAPTSRI  480
PSHNFMGINE NNEKISCLLT VGNPTLSSKE NSETKAQHIV LFGQLILTDQ RSSQSFSGDT  540
NGNSSSDGNP EKTANLSDGS VSVFQQNGLQ ENSSDDGSPW YKDHQKTNLG LETGHCKVFL  600
ESEDVGRTLD LSVIGSYEEL YGKLANMFGI ENSDMPSCVL YRDMAGATKH TGDEPFSEFL  660
KTARRLTILT DSGSDNIGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein