PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690640.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 507aa MW: 56086.6 Da PI: 5.7577

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690640.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	150	169	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ykC++C++ F +++L +H+ XP_021690640.1 150 YKCHKCTMAFDEPDDLLQHL 169 9******************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MEMEMKKGEI MMMNKNGMKV DLLALGSMED LYDYGEELRR LTMGMHTEAE MLGALQGLEG 60 EWVTSRRKKK IVNASMLGDV LPRGWKLMLC IKKKAGYFWI ACRRYISSNG QQFMSCEEVS 120 SYLLQDNGDE KQFSPLKIGI TRRVQTPGKY KCHKCTMAFD EPDDLLQHLL PAHQRTSKSR 180 RQGTFTNERI GSDMGTVAIN SDIKINDEII SAIPNYKRKE NTTGKSCCGM QDIVCSSIND 240 KAEKMSEVAN VVAVENYVCP GAVSAILNKE NDSVCKSSDE KNVLGCFTDR INNLDSQEEG 300 SQNCSLAAVG RKQACAIDGN EDQVCVSLMK EHYQVTGSDS GLIASNSEEK TVDGEAIKDR 360 LLSSAISCMK IDDTVFVGKD KLRTGFDNNC SIQENVATNS KEQSSEGCYG GDQRYGSVNN 420 VHGLSISIVM EMRSEMGSKE GLPSSLDETA CFSNDKVNQV SARTLNKPKL DEVCKSRNDV 480 QTVGFGSNNT LIMSWRVASE AAQLFHH

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MEMEMKKGEI MMMNKNGMKV DLLALGSMED LYDYGEELRR LTMGMHTEAE MLGALQGLEG  60
EWVTSRRKKK IVNASMLGDV LPRGWKLMLC IKKKAGYFWI ACRRYISSNG QQFMSCEEVS  120
SYLLQDNGDE KQFSPLKIGI TRRVQTPGKY KCHKCTMAFD EPDDLLQHLL PAHQRTSKSR  180
RQGTFTNERI GSDMGTVAIN SDIKINDEII SAIPNYKRKE NTTGKSCCGM QDIVCSSIND  240
KAEKMSEVAN VVAVENYVCP GAVSAILNKE NDSVCKSSDE KNVLGCFTDR INNLDSQEEG  300
SQNCSLAAVG RKQACAIDGN EDQVCVSLMK EHYQVTGSDS GLIASNSEEK TVDGEAIKDR  360
LLSSAISCMK IDDTVFVGKD KLRTGFDNNC SIQENVATNS KEQSSEGCYG GDQRYGSVNN  420
VHGLSISIVM EMRSEMGSKE GLPSSLDETA CFSNDKVNQV SARTLNKPKL DEVCKSRNDV  480
QTVGFGSNNT LIMSWRVASE AAQLFHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	66	94	RRKKKIVNASMLGDVLPRGWKLMLCIKKK
2	67	95	RRKKKIVNASMLGDVLPRGWKLMLCIKKK