PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690008.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 342aa MW: 38345.1 Da PI: 7.4997

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690008.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l d++k++G g+W+ ++ g++R++k+c++rw +yl XP_021690008.1 14 KGPWTAEEDQKLMDYIKKHGHGRWRILPKNAGLKRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	51.8	1.9e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_021690008.1 67 RGKFSFEEEEAIIRLHSVLGNK-WSAIASRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGKSACCDKN GLKKGPWTAE EDQKLMDYIK KHGHGRWRIL PKNAGLKRCG KSCRLRWTNY 60 LRSDIKRGKF SFEEEEAIIR LHSVLGNKWS AIASRLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHNPRV DLLQLYSVLN SSPYISSHQI DISSLLGIGS MLNPNLLNPA TSFFSFQSSS 180 QEASPENVQE NQLDNSQVHQ NQFQSLQPSQ IQACIDSSAL FLDETQLLQA HLKQLSTSPA 240 NFICQNSSQC SWQETGNFPT MGESLVPYHE IGNQTLIKSS FENLSNLGFS SLISSTPSSS 300 TTPLQSSSTT YVNGSTEDER DSYCSNMLMF DIPNSLDVNG LL

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGKSACCDKN GLKKGPWTAE EDQKLMDYIK KHGHGRWRIL PKNAGLKRCG KSCRLRWTNY  60
LRSDIKRGKF SFEEEEAIIR LHSVLGNKWS AIASRLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHNPRV DLLQLYSVLN SSPYISSHQI DISSLLGIGS MLNPNLLNPA TSFFSFQSSS  180
QEASPENVQE NQLDNSQVHQ NQFQSLQPSQ IQACIDSSAL FLDETQLLQA HLKQLSTSPA  240
NFICQNSSQC SWQETGNFPT MGESLVPYHE IGNQTLIKSS FENLSNLGFS SLISSTPSSS  300
TTPLQSSSTT YVNGSTEDER DSYCSNMLMF DIPNSLDVNG LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	7e-92	MYB family protein