PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021689893.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 492aa MW: 55059.1 Da PI: 5.3814

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021689893.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.6	2.6e-35	23	113	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d++++e++sws+n+nsfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F k++k+ll++ XP_021689893.1 23 FLLKTYDMVDDSSTDEIVSWSSNKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEDFVKDQKHLLKN 108 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_021689893.1 109 IHRRK 113 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MEVAPSSASS AVVGGGGGGP APFLLKTYDM VDDSSTDEIV SWSSNKNSFV VWNPPEFARL 60 LLPTYFKHNN FSSFIRQLNT YGFRKIDPER WEFANEDFVK DQKHLLKNIH RRKPIHSHSH 120 PQGSSGDPER AALEEEIDRL ARDKASLEAS VAGSKQQRSV EKLQLEDLTQ RMDSMEQRQE 180 KLLICLEKAV QNPAFIEHLA RKIDSMDFSA YNKKRRLPQV DHSKLIAENS FVDNHSCSRP 240 EFGNVINQDF SNKLRLELSP AVSDINLVSN STQSSIEDGG SPQRKISEGD LKDAPPRTSC 300 LLFAAETLEL ADTGTSYAYK VDPSFPKKVT VNETPGLHLL QQNLTSNEEV DGHISCHLNL 360 TLASSPLQVN RNPYPSRMPQ LRQEMCKPSE SQFNDNGKES DMMVISEDMN AGDGATTLSS 420 SKEAPNSNQG PSAAPARVND VFWEQFLTER PGSSEYEEAN SNYRANPYDE QEDRRSSHGV 480 VRNVKNMEHL SL

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MEVAPSSASS AVVGGGGGGP APFLLKTYDM VDDSSTDEIV SWSSNKNSFV VWNPPEFARL  60
LLPTYFKHNN FSSFIRQLNT YGFRKIDPER WEFANEDFVK DQKHLLKNIH RRKPIHSHSH  120
PQGSSGDPER AALEEEIDRL ARDKASLEAS VAGSKQQRSV EKLQLEDLTQ RMDSMEQRQE  180
KLLICLEKAV QNPAFIEHLA RKIDSMDFSA YNKKRRLPQV DHSKLIAENS FVDNHSCSRP  240
EFGNVINQDF SNKLRLELSP AVSDINLVSN STQSSIEDGG SPQRKISEGD LKDAPPRTSC  300
LLFAAETLEL ADTGTSYAYK VDPSFPKKVT VNETPGLHLL QQNLTSNEEV DGHISCHLNL  360
TLASSPLQVN RNPYPSRMPQ LRQEMCKPSE SQFNDNGKES DMMVISEDMN AGDGATTLSS  420
SKEAPNSNQG PSAAPARVND VFWEQFLTER PGSSEYEEAN SNYRANPYDE QEDRRSSHGV  480
VRNVKNMEHL SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-177	HSF family protein