PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021689758.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 517aa MW: 60094.2 Da PI: 6.4563

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021689758.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.8	1.5e-12	75	154	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+e+A+ GFsv k++ + r g+ + +t C k k+ k+ ++r++C ak++ ++++g w+++k+ + HnHel p XP_021689758.1 75 NFYKEHARLKGFSVFKRSAVNV-RGGSRKYQTISCDKGRKAIGAKS----------SKRINCPAKINAILRENGMWQISKVISSHNHELEP 154 6************9998877.88889999998777666544..........69*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MAGLSQGRSY RRQLFDEIFD FSEDDSLFTE DVEEDESAGD QDMNEGGIRA VANTNAIEEG 60 PLTGMLFPCI STMFNFYKEH ARLKGFSVFK RSAVNVRGGS RKYQTISCDK GRKAIGAKSS 120 KRINCPAKIN AILRENGMWQ ISKVISSHNH ELEPSMSRLM VAHRSLNMDM KRRLEANDIA 180 GIRPAKSIRL LEVQAGGPEN LSCLSKDYRN FIERKRRLRL GDGDAEAIRK LFVRMQRNDP 240 EFFYSFDLDD DSRLSNVLWV HPRSRAAYEE FNDVVSFDTT YLVNRYKLPF ATIVGVNHHG 300 QSILLGCALI SHEDVNTFKW LFMTWLEAME DVHPNSILTD QCESMRKAIR EVPEKSRGVI 360 DYDSACLEFK AVIYDSLTIE MFERNWNEFV VKHGLERNEW LSKLYVDREY WVPIYLNHTF 420 WAGMVSTQRS ESLHAYFDGY VNSMSTLKKF VEQYEIAMCD KNEKEFYADF KSKNTVVNCI 480 SVFEWEQQFQ KAFTNSIFKL VQEEIKQMWY CHVIQPT

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MAGLSQGRSY RRQLFDEIFD FSEDDSLFTE DVEEDESAGD QDMNEGGIRA VANTNAIEEG  60
PLTGMLFPCI STMFNFYKEH ARLKGFSVFK RSAVNVRGGS RKYQTISCDK GRKAIGAKSS  120
KRINCPAKIN AILRENGMWQ ISKVISSHNH ELEPSMSRLM VAHRSLNMDM KRRLEANDIA  180
GIRPAKSIRL LEVQAGGPEN LSCLSKDYRN FIERKRRLRL GDGDAEAIRK LFVRMQRNDP  240
EFFYSFDLDD DSRLSNVLWV HPRSRAAYEE FNDVVSFDTT YLVNRYKLPF ATIVGVNHHG  300
QSILLGCALI SHEDVNTFKW LFMTWLEAME DVHPNSILTD QCESMRKAIR EVPEKSRGVI  360
DYDSACLEFK AVIYDSLTIE MFERNWNEFV VKHGLERNEW LSKLYVDREY WVPIYLNHTF  420
WAGMVSTQRS ESLHAYFDGY VNSMSTLKKF VEQYEIAMCD KNEKEFYADF KSKNTVVNCI  480
SVFEWEQQFQ KAFTNSIFKL VQEEIKQMWY CHVIQPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	213	218	ERKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	5e-86	FAR1 family protein