PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021689230.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 399aa    MW: 43622 Da    PI: 8.2799
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021689230.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH39.11.2e-12427226
                    -S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                    k elCr+f+r G C+yG+rCkF H+
  XP_021689230.1  4 KKELCRNFQR-GSCQYGERCKFLHV 27
                    78********.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MPIKKELCRN FQRGSCQYGE RCKFLHVTPQ QQQKPNNNAF GFGSQQQQQQ NRFSNPFGFG  60
VQSKSPNDFA NKQQQFKPFE NKWTRFSPIS NGGTSSRQPD NQPQAVNHKC TDPDSCKRLI  120
VEDFEHEKPL WKLTCYGHSK NGPCDIVGDI SYEELRAAAY DDAKHGLSLQ SIVERERNLL  180
NSKLTEFENL LRNPYVAPQN SALSQSTFPG VTPNAISTTG ENNAPPAVSS FSQLGASLNM  240
GSKTRPSAPL NNPFGQPNLF SNSSQSFSTF GIRPSASSNN AFGQPNFFSN ASQTSSAFGT  300
NSFAPANAGF SSRTINNQSS PFSSAVSTEM TNSSRSSAQP LIISDAPNSA SNAVEPVTKH  360
IQSVNGMQRG TVSGDASIWL KENWIPGEIP EEAPPDQYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.13e-87C3H family protein