PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021689146.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 840aa MW: 92350.8 Da PI: 6.1823 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.7 | 4.7e-19 | 21 | 79 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+l++++++ps +r++L +++ +++ +q+kvWFqNrR +ek+ XP_021689146.1 21 KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 79 5679*****************************************************97 PP | |||||||
2 | START | 187.1 | 8.9e-59 | 166 | 374 | 2 | 205 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 +aee+++e+++ka+ ++ Wv+++ +++g++++ +++ s++++g a+ra+g+v +++ v+e+l+d++ W ++++++++l+++s+g g+++l XP_021689146.1 166 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPT-RVAEILKDRPSWFHDCRAVDVLNALSTGngGTIELL 259 7899******************************************************.8888888888************************** PP EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS START 95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185 +++l+a+++l+p Rdf+ +Ry+ l++g++v++++S++++q+ p+ ++++vRae+lpSg+li+p+++g+s +++v+hvdl+ ++++++lr+l+ XP_021689146.1 260 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSmppTQHFVRAEMLPSGYLIRPCEGGGSIIHVVDHVDLEPWSVPEVLRPLY 354 *******************************************99999*********************************************** PP HHHHHHHHHHHHHHTXXXXX CS START 186 ksglaegaktwvatlqrqce 205 +s++ ++kt++a+l+++++ XP_021689146.1 355 ESSTLLAQKTTMAALRHLRQ 374 ***************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 840 aa Download sequence |
MMAVTSACKD GGSKMAMDNG KYVRYTPEQV EALERLYHEC PKPSSMRRQQ LIRECPILSN 60 IEPKQIKVWF QNRRCREKQR TEASRLQAVN RKLTAMNKLL MEENDRLQKQ VSQLVYENSY 120 FRQQTQNATN LATTDTSCES VVTSGQHHLT PQHQPRDASP AGLLSIAEET LAEFLSKATG 180 TAVEWVQMPG MKPGPDSIGI VAISHGCPGV AARACGLVGL EPTRVAEILK DRPSWFHDCR 240 AVDVLNALST GNGGTIELLY MQLYAPTTLA PARDFWLLRY TSVLEDGSLV VCERSLNNTQ 300 NGPSMPPTQH FVRAEMLPSG YLIRPCEGGG SIIHVVDHVD LEPWSVPEVL RPLYESSTLL 360 AQKTTMAALR HLRQISQEVS QPNASGWGRR PAALRALSQR LSKGFNEAVN GFTDEGWSML 420 ESDGIDDVTV LVNSSPGKMM GLNISYASGF PSMSNGVLCA KASMLLQNVP PAILLRFLRE 480 HRSEWADSGI DAYAAAAVKA GPCTLPVSRV GNFGGQVILP LAHTIEHEEF MEVIKLENMG 540 YQEDMIMPGD IFLLQLCSGV DENAVGTCAE LIFAPIDASF SDDAPIIPSG FRIIPLDSRM 600 DAASPNRTLD LASALDVGPT GNKASSDFPG HCGSTKSVMT IAFQFAFELH LQENVASMSR 660 QYVRSVIASV QRVALALSPS RFGSHVGFRP PPGTPEAHTL ARWICQSYRC YLGVELLKSE 720 GSESILKSLW HHSDAVMCCS LKALPVFTFA NQAGLDMLET TLVALQDITL EKIFDDNGRK 780 TLCSEFPQIM QQGFMCLQGG ICLSSMGRPV SYERAVAWKV LNEEETAHCI CFMFINWSFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32880.1 | 0.0 | HD-ZIP family protein |