PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021688874.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family SBP
Protein Properties Length: 778aa    MW: 87618 Da    PI: 6.8204
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021688874.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP117.95e-37128204177
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     +Cqv+gCead+se+k yh+rh+vC  +++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k 
  XP_021688874.1 128 RCQVPGCEADISELKGYHKRHRVCLRCANASTVVLDGENKRYCQQCGKFHLLSDFDEGKRSCRRKLERHNNRRRRKP 204
                     6************************************************************************9975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 778 aa     Download sequence    
MTEPSSSPSP DSRRSKLDDM DIHLPVAEDP SSSIWDWGDL LDFTVDDQFP ITFDSVDTTS  60
TIVSQVDPIE ATPDPDKVRK RDPRLTCSNF LAGRVPCECP ELDEKLEEEG MPGKKRVRTT  120
RSSTGVTRCQ VPGCEADISE LKGYHKRHRV CLRCANASTV VLDGENKRYC QQCGKFHLLS  180
DFDEGKRSCR RKLERHNNRR RRKPHDSKGA VDKEPQGELL SEDTACDGEA EKDCQIVEKE  240
ALVESEDGKV SGLHSAPNSQ NLNSDSGVSV GTPKDSGKDD SRFALSPFNC ENKSFYSSAC  300
PTGRISFKLY DWNPAEFPRR LRHQIFEWLA SMPVELEGYI RPGCTILTAF LAMPTFMWAK  360
LLEDPVSYLH DFVIVPGKML SKRSPMLIYL NNMIFHVMKD GHSVTKVNME GRAPRLHYVH  420
PTCFEAGKPI EFVACGSNLL QPKFRLLVSF AGKYLAYDYC IVLPHDRTEG CSSLDHQLCK  480
IFIPHVEPNL FGPAFIEVEN ERGLSNFIPV LVGNGEICSE MKIIQQRFAS SHLSSGSQCE  540
FSAHRQMAFS ELVVDIGWLL KKPSSESFHQ ITRSSQIQRL NSLLNFLVHH ESTATLDKIL  600
QNLKIILDEM EKNRVAYGIS DSEMFLLQKY MDSASDILLQ KVKKSDGLAI HWEYTVDESD  660
VRRCYESSMP SVAAIFTSED LERSSNGKLG VISNLYAVVR SDKVPLLSKE VVMDVRLSKE  720
CPNKSSSLCF SNRVLKSRPT VFLIATFALC LGVCAILFHP NQVSKFAISI RRCLTERF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190202RRKLERHNNRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18830.20.0SBP family protein