PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021688871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 811aa MW: 91388.5 Da PI: 6.9976 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 117.9 | 5.3e-37 | 128 | 204 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+gCead+se+k yh+rh+vC +++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k XP_021688871.1 128 RCQVPGCEADISELKGYHKRHRVCLRCANASTVVLDGENKRYCQQCGKFHLLSDFDEGKRSCRRKLERHNNRRRRKP 204 6************************************************************************9975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 811 aa Download sequence |
MTEPSSSPSP DSRRSKLDDM DIHLPVAEDP SSSIWDWGDL LDFTVDDQFP ITFDSVDTTS 60 TIVSQVDPIE ATPDPDKVRK RDPRLTCSNF LAGRVPCECP ELDEKLEEEG MPGKKRVRTT 120 RSSTGVTRCQ VPGCEADISE LKGYHKRHRV CLRCANASTV VLDGENKRYC QQCGKFHLLS 180 DFDEGKRSCR RKLERHNNRR RRKPHDSKGA VDKEPQGELL SEDTACDGEA EKDCQIVEKE 240 ALVESEDGKV SGLHSAPNSQ NLNSDSGVSV GTPKDSGKDD SRFALSPFNC ENKSFYSSAC 300 PTGRISFKLY DWNPAEFPRR LRHQIFEWLA SMPVELEGYI RPGCTILTAF LAMPTFMWAK 360 LLEDPVSYLH DFVIVPGKML SKRSPMLIYL NNMIFHVMKD GHSVTKVNME GRAPRLHYVH 420 PTCFEAGKPI EFVACGSNLL QPKFRLLVSF AGKYLAYDYC IVLPHDRTEG CSSLDHQLCK 480 IFIPHVEPNL FGPAFIEVEN ERGLSNFIPV LVGNGEICSE MKIIQQRFAS SHLSSGSQCE 540 FSAHRQMAFS ELVVDIGWLL KKPSSESFHQ ITRSSQIQRL NSLLNFLVHH ESTATLDKIL 600 QNLKIILDEM EKNRVAYGIS DSEMFLLQKY MDSASDILLQ KVKKSDGLAI HWEYTVDESD 660 VRRCYESSMP SVAAIFTSED LERSSNGKLG VISNLYAVVR SDKVPLLSKE VVMDVRLSKE 720 CPNKSSSLCF SNRVLKSRPT VFLIATFALC LGVCAILFHP NQPGRRNQKD TTIRLSRTLF 780 HIKMGSDRIF SVLFLYRISI QLIVEVFGGC L |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 190 | 202 | RRKLERHNNRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G18830.1 | 0.0 | SBP family protein |