PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687513.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

G2-like

Protein Properties

Length: 635aa MW: 72244.6 Da PI: 7.4601

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687513.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	34.4	5e-11	58	82	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWt++LHerFv+av+ LGG++ XP_021687513.1 58 KPRLRWTSDLHERFVDAVTPLGGAN 82 79*********************86 PP
2	Myb_DNA-binding	26.4	1.6e-08	60	97	1	43
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 r+rWT +++e++vdav+ lGg + ++ m+ ++c+s+ XP_021687513.1 60 RLRWTSDLHERFVDAVTPLGGANMFELSEDMN-----NNCRSY 97 89******************************.....999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MFQRPIRPHP GGAGPAGGNG IVSHQEDMQV QRQNQNHTTN TQKIGAAEPC LVFTSDPKPR 60 LRWTSDLHER FVDAVTPLGG ANMFELSEDM NNNCRSYTKG HHADNERKGT YTLPFKKSPP 120 GRTKLKMEMI NSRDGDGDQE TSVSIARGGP IYVPNLVGPL TRVPDFESAL FYELEDLKDE 180 LCLHAISPSN DDNILIDKLK IYSDEDLVEM ALKETLNKNE SSLRPSSEGL IARRENDIRD 240 SSNNTDLESS ELGDPSATLE SLNGETYCNG TIANKKSRKR QRLLKSSDGS RSGTSCNRTI 300 INNNSRKGKG KKANKCDVGE SCFAKVDEVL KIKQKQDQDK ATVRLHSFNC KANKGAIPSS 360 EPESGERLKM LLSTNSGKQQ LKPSNVQEHI PVRHPEVVLC IEVYHNIRHW LKTQEFLVLG 420 RQMLTEMRDR IYCMTDQVMQ KAGHYDPSGY FLIEDVFCND TRDPSAIDYS EPIFDWLTNS 480 KDDALRKWEC IISGELQRKQ KAVIGEVTTS QLPQFRRVDM QKTRFCDLRF RLGAGYLYCH 540 QGDCKHTIVI RDLRLIHPED VQNRAAYPIV IFQLKLRFQK CNVCNIFRAT KVTLDVKWTP 600 DNPCYFCNDC YYLIHYSENG SLLYSDFSTY DYLHD

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MFQRPIRPHP GGAGPAGGNG IVSHQEDMQV QRQNQNHTTN TQKIGAAEPC LVFTSDPKPR  60
LRWTSDLHER FVDAVTPLGG ANMFELSEDM NNNCRSYTKG HHADNERKGT YTLPFKKSPP  120
GRTKLKMEMI NSRDGDGDQE TSVSIARGGP IYVPNLVGPL TRVPDFESAL FYELEDLKDE  180
LCLHAISPSN DDNILIDKLK IYSDEDLVEM ALKETLNKNE SSLRPSSEGL IARRENDIRD  240
SSNNTDLESS ELGDPSATLE SLNGETYCNG TIANKKSRKR QRLLKSSDGS RSGTSCNRTI  300
INNNSRKGKG KKANKCDVGE SCFAKVDEVL KIKQKQDQDK ATVRLHSFNC KANKGAIPSS  360
EPESGERLKM LLSTNSGKQQ LKPSNVQEHI PVRHPEVVLC IEVYHNIRHW LKTQEFLVLG  420
RQMLTEMRDR IYCMTDQVMQ KAGHYDPSGY FLIEDVFCND TRDPSAIDYS EPIFDWLTNS  480
KDDALRKWEC IISGELQRKQ KAVIGEVTTS QLPQFRRVDM QKTRFCDLRF RLGAGYLYCH  540
QGDCKHTIVI RDLRLIHPED VQNRAAYPIV IFQLKLRFQK CNVCNIFRAT KVTLDVKWTP  600
DNPCYFCNDC YYLIHYSENG SLLYSDFSTY DYLHD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	275	315	KKSRKRQRLLKSSDGSRSGTSCNRTIINNNSRKGKGKKANK
2	307	313	KGKGKKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	4e-13	G2-like family protein