PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687512.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

G2-like

Protein Properties

Length: 640aa MW: 72970.5 Da PI: 7.0793

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	34.3	5e-11	58	82	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWt++LHerFv+av+ LGG++ XP_021687512.1 58 KPRLRWTSDLHERFVDAVTPLGGAN 82 79*********************86 PP
2	Myb_DNA-binding	26.4	1.6e-08	60	97	1	43
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 r+rWT +++e++vdav+ lGg + ++ m+ ++c+s+ XP_021687512.1 60 RLRWTSDLHERFVDAVTPLGGANMFELSEDMN-----NNCRSY 97 89******************************.....999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 640 aa Download sequence
MFQRPIRPHP GGAGPAGGNG IVSHQEDMQV QRQNQNHTTN TQKIGAAEPC LVFTSDPKPR 60 LRWTSDLHER FVDAVTPLGG ANMFELSEDM NNNCRSYTKG HHADNERRTK LKMEMINSRD 120 GDGDQETSVS IARGGPIYVP NLVGPLTRVP DFESALFYEL EDLKDELCLH AISPSNDDNI 180 LIDKLKIYSD EDLVEMALKE TLNKNESSLR PSSEGLIARF IVVYSRSDTS FLLMYACMRE 240 NDIRDSSNNT DLESSELGDP SATLESLNGE TYCNGTIANK KSRKRQRLLK SSDGSRSGTS 300 CNRTIINNNS RKGKGKKANK CDVGESCFAK VDEVLKIKQK QDQDKATVRL HSFNCKANKG 360 AIPSSEPESG ERLKMLLSTN SGKQQLKPSN VQEHIPVRHP EVVLCIEVYH NIRHWLKTQE 420 FLVLGRQMLT EMRDRIYCMT DQVMQKAGHY DPSGYFLIED VFCNDTRDPS AIDYSEPIFD 480 WLTNSKDDAL RKWECIISGE LQRKQKAVIG EVTTSQLPQF RRVDMQKTRF CDLRFRLGAG 540 YLYCHQGDCK HTIVIRDLRL IHPEDVQNRA AYPIVIFQLK LRFQKCNVCN IFRATKVTLD 600 VKWTPDNPCY FCNDCYYLIH YSENGSLLYS DFSTYDYLHD

Sequence ? help Back to Top

Protein Sequence Length: 640 aa Download sequence

MFQRPIRPHP GGAGPAGGNG IVSHQEDMQV QRQNQNHTTN TQKIGAAEPC LVFTSDPKPR  60
LRWTSDLHER FVDAVTPLGG ANMFELSEDM NNNCRSYTKG HHADNERRTK LKMEMINSRD  120
GDGDQETSVS IARGGPIYVP NLVGPLTRVP DFESALFYEL EDLKDELCLH AISPSNDDNI  180
LIDKLKIYSD EDLVEMALKE TLNKNESSLR PSSEGLIARF IVVYSRSDTS FLLMYACMRE  240
NDIRDSSNNT DLESSELGDP SATLESLNGE TYCNGTIANK KSRKRQRLLK SSDGSRSGTS  300
CNRTIINNNS RKGKGKKANK CDVGESCFAK VDEVLKIKQK QDQDKATVRL HSFNCKANKG  360
AIPSSEPESG ERLKMLLSTN SGKQQLKPSN VQEHIPVRHP EVVLCIEVYH NIRHWLKTQE  420
FLVLGRQMLT EMRDRIYCMT DQVMQKAGHY DPSGYFLIED VFCNDTRDPS AIDYSEPIFD  480
WLTNSKDDAL RKWECIISGE LQRKQKAVIG EVTTSQLPQF RRVDMQKTRF CDLRFRLGAG  540
YLYCHQGDCK HTIVIRDLRL IHPEDVQNRA AYPIVIFQLK LRFQKCNVCN IFRATKVTLD  600
VKWTPDNPCY FCNDCYYLIH YSENGSLLYS DFSTYDYLHD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	320	KKSRKRQRLLKSSDGSRSGTSCNRTIINNNSRKGKGKKANK
2	312	318	KGKGKKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.2	4e-13	G2-like family protein