PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687509.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

G2-like

Protein Properties

Length: 653aa MW: 74345 Da PI: 7.3205

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	34.3	5.2e-11	58	82	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWt++LHerFv+av+ LGG++ XP_021687509.1 58 KPRLRWTSDLHERFVDAVTPLGGAN 82 79*********************86 PP
2	Myb_DNA-binding	26.4	1.6e-08	60	97	1	43
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 r+rWT +++e++vdav+ lGg + ++ m+ ++c+s+ XP_021687509.1 60 RLRWTSDLHERFVDAVTPLGGANMFELSEDMN-----NNCRSY 97 89******************************.....999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MFQRPIRPHP GGAGPAGGNG IVSHQEDMQV QRQNQNHTTN TQKIGAAEPC LVFTSDPKPR 60 LRWTSDLHER FVDAVTPLGG ANMFELSEDM NNNCRSYTKG HHADNERKGT YTLPFKKSPP 120 GRTKLKMEMI NSRDGDGDQE TSVSIARGGP IYVPNLVGPL TRVPDFESAL FYELEDLKDE 180 LCLHAISPSN DDNILIDKLK IYSDEDLVEM ALKETLNNES SLRPSSEGLI ARFIVVYSRS 240 DTSFLLMYAC MRENDIRDSS NNTDLESSEL GDPSATLESL NGETYCNGTI ANKKSRKRQR 300 LLKSSDGSRS GTSCNRTIIN NNSRKGKGKK ANKCDVGESC FAKVDEVLKI KQKQDQDKAT 360 VRLHSFNCKA NKGAIPSSEP ESGERLKMLL STNSGKQQLK PSNVQEHIPV RHPEVVLCIE 420 VYHNIRHWLK TQEFLVLGRQ MLTEMRDRIY CMTDQVMQKA GHYDPSGYFL IEDVFCNDTR 480 DPSAIDYSEP IFDWLTNSKD DALRKWECII SGELQRKQKA VIGEVTTSQL PQFRRVDMQK 540 TRFCDLRFRL GAGYLYCHQG DCKHTIVIRD LRLIHPEDVQ NRAAYPIVIF QLKLRFQKCN 600 VCNIFRATKV TLDVKWTPDN PCYFCNDCYY LIHYSENGSL LYSDFSTYDY LHD

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MFQRPIRPHP GGAGPAGGNG IVSHQEDMQV QRQNQNHTTN TQKIGAAEPC LVFTSDPKPR  60
LRWTSDLHER FVDAVTPLGG ANMFELSEDM NNNCRSYTKG HHADNERKGT YTLPFKKSPP  120
GRTKLKMEMI NSRDGDGDQE TSVSIARGGP IYVPNLVGPL TRVPDFESAL FYELEDLKDE  180
LCLHAISPSN DDNILIDKLK IYSDEDLVEM ALKETLNNES SLRPSSEGLI ARFIVVYSRS  240
DTSFLLMYAC MRENDIRDSS NNTDLESSEL GDPSATLESL NGETYCNGTI ANKKSRKRQR  300
LLKSSDGSRS GTSCNRTIIN NNSRKGKGKK ANKCDVGESC FAKVDEVLKI KQKQDQDKAT  360
VRLHSFNCKA NKGAIPSSEP ESGERLKMLL STNSGKQQLK PSNVQEHIPV RHPEVVLCIE  420
VYHNIRHWLK TQEFLVLGRQ MLTEMRDRIY CMTDQVMQKA GHYDPSGYFL IEDVFCNDTR  480
DPSAIDYSEP IFDWLTNSKD DALRKWECII SGELQRKQKA VIGEVTTSQL PQFRRVDMQK  540
TRFCDLRFRL GAGYLYCHQG DCKHTIVIRD LRLIHPEDVQ NRAAYPIVIF QLKLRFQKCN  600
VCNIFRATKV TLDVKWTPDN PCYFCNDCYY LIHYSENGSL LYSDFSTYDY LHD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	293	333	KKSRKRQRLLKSSDGSRSGTSCNRTIINNNSRKGKGKKANK
2	325	331	KGKGKKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	4e-13	G2-like family protein