PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687474.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 358aa MW: 39967.9 Da PI: 7.66

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.4	7.5e-36	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fkkg+k+ll++ XP_021687474.1 25 FLTKTYQLVDDPTTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKKGEKQLLCE 110 9***************************************************************99.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k++ XP_021687474.1 111 IHRRKTA 117 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPTTDH IVSWGEDDTT FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKQLLCE IHRRKTAQPQ 120 VAINHHHHHH PHSPLGVNGP SFFPFSSRVS ISPSDSDEQA NNWCDSPPLS SPRGVANASV 180 INGGGYNSSV TALSEDNERL RRSNNMLVSE LAHMRKLYND IIYFVQNHVK PVTPSNSYPS 240 SLLLCAPTST ANPFASNGSL VQKPLNQLYG YYPPTNAKQI PQVQVLNSPS NTSQSSLTIL 300 EDSNSNGCNT KLFGVPLQSK KRTHPEYASN TGNMEASKAR LVLEKDDLGL NLMPPSTC

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPTTDH IVSWGEDDTT FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKQLLCE IHRRKTAQPQ  120
VAINHHHHHH PHSPLGVNGP SFFPFSSRVS ISPSDSDEQA NNWCDSPPLS SPRGVANASV  180
INGGGYNSSV TALSEDNERL RRSNNMLVSE LAHMRKLYND IIYFVQNHVK PVTPSNSYPS  240
SLLLCAPTST ANPFASNGSL VQKPLNQLYG YYPPTNAKQI PQVQVLNSPS NTSQSSLTIL  300
EDSNSNGCNT KLFGVPLQSK KRTHPEYASN TGNMEASKAR LVLEKDDLGL NLMPPSTC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	320	324	KKRTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	1e-114	HSF family protein