PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687421.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 924aa MW: 101432 Da PI: 7.2328

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.1	3.4e-18	331	431	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g+ W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_021687421.1 331 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKDWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 423 99************************555567778***********99899999999.*******************876.7777 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++++ XP_021687421.1 424 LVMGFRKA 431 88877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 924 aa Download sequence
MRELILRMKS KTCMNAVCGA STSSGSRKGW PLRSGDFANL CDKCGSAYEQ SIFCDIFHSK 60 DSGWRDCASC GKRLHCGCIA SIFLLELLDH GGGVNCVSCT KSSGVNSVMG SEKPNGFGTS 120 KGDDIGEMQS ADTQLDGERK LMQLGCTPEG IGTIHLLQLQ NGETSGSFRQ MKQEDNIPPV 180 GEIGITSFSN FNQASNGLSQ TAKPEIHKAT IAAKELYESL AQTNLSMTLG TPLGNPNPFP 240 GAVVDERGQS KALSPFQQGP RSRHLLPKPP KSALGTGLES NAGMVSQIRV ARPPTEGRGR 300 NQLLPRYWPR ITDQELQQIS ADANSTVVPL FEKVLSASDA GRIGRLVLPK ACAEAYFPPI 360 SQPEGLPLRI QDVKGKDWVF QFRFWPNNNS RMYVLEGVTP CIQSMQLQAG DTVTFSRMDP 420 EGKLVMGFRK ASNNMAMQDI QPSAIPNGVH SSDNFFSGVS ENLPIISGYS GLLQSLKGSS 480 DTHLSALSKH LHSTNGDISW HTSEKHEERM RESLLLPSLL VPERKRTRNI GSKSKRLLID 540 SLDSLELKLT WEEAQDLLRP PPSVKPSIVT IEDHDFEEYE EPPVFGKRTI FVVRSIGGQE 600 QWAQCDSCCK WRRLPVDVLL PPKWTCVDNA WDQSRCSCSA PDELSPRELE HLLRLNKEFK 660 KRRMLSIHRP AQEHKSSGLD ALANAAILGD AGDPGTTVVA TTTKHPRHRP GCSCIVCIQP 720 PSGKGKHKPT CTCTVCMTVK RRFKTMMMRK KKRQSEHEAE IALRDQNMSG PRDEAEVESS 780 SKLVSTPQDP SENEDRLANE LEPKSQSNNL LNKMIDIGKG HIDLNCHPAR EEESQVGLAR 840 MSMLSLLQVA SLPLDTYLKQ NGLTSLVSEQ QGSSASQMPA QAGESEGRLP EDCQFVSAVQ 900 EQKQESGGEE NRGPGPEQSQ NDPV

Sequence ? help Back to Top

Protein Sequence Length: 924 aa Download sequence

MRELILRMKS KTCMNAVCGA STSSGSRKGW PLRSGDFANL CDKCGSAYEQ SIFCDIFHSK  60
DSGWRDCASC GKRLHCGCIA SIFLLELLDH GGGVNCVSCT KSSGVNSVMG SEKPNGFGTS  120
KGDDIGEMQS ADTQLDGERK LMQLGCTPEG IGTIHLLQLQ NGETSGSFRQ MKQEDNIPPV  180
GEIGITSFSN FNQASNGLSQ TAKPEIHKAT IAAKELYESL AQTNLSMTLG TPLGNPNPFP  240
GAVVDERGQS KALSPFQQGP RSRHLLPKPP KSALGTGLES NAGMVSQIRV ARPPTEGRGR  300
NQLLPRYWPR ITDQELQQIS ADANSTVVPL FEKVLSASDA GRIGRLVLPK ACAEAYFPPI  360
SQPEGLPLRI QDVKGKDWVF QFRFWPNNNS RMYVLEGVTP CIQSMQLQAG DTVTFSRMDP  420
EGKLVMGFRK ASNNMAMQDI QPSAIPNGVH SSDNFFSGVS ENLPIISGYS GLLQSLKGSS  480
DTHLSALSKH LHSTNGDISW HTSEKHEERM RESLLLPSLL VPERKRTRNI GSKSKRLLID  540
SLDSLELKLT WEEAQDLLRP PPSVKPSIVT IEDHDFEEYE EPPVFGKRTI FVVRSIGGQE  600
QWAQCDSCCK WRRLPVDVLL PPKWTCVDNA WDQSRCSCSA PDELSPRELE HLLRLNKEFK  660
KRRMLSIHRP AQEHKSSGLD ALANAAILGD AGDPGTTVVA TTTKHPRHRP GCSCIVCIQP  720
PSGKGKHKPT CTCTVCMTVK RRFKTMMMRK KKRQSEHEAE IALRDQNMSG PRDEAEVESS  780
SKLVSTPQDP SENEDRLANE LEPKSQSNNL LNKMIDIGKG HIDLNCHPAR EEESQVGLAR  840
MSMLSLLQVA SLPLDTYLKQ NGLTSLVSEQ QGSSASQMPA QAGESEGRLP EDCQFVSAVQ  900
EQKQESGGEE NRGPGPEQSQ NDPV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	740	751	KRRFKTMMMRKK
2	740	753	KRRFKTMMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein