PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021687366.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 323aa    MW: 36766.9 Da    PI: 6.6427
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021687366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH37.73.4e-12186211126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     y   +C+++ +tG+C yGd CkF+H+
  XP_021687366.1 186 YQPDICKDYKETGYCGYGDACKFMHD 211
                     67789********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MADSGESQQP EPVCNFFRKP LKNKNIRKRI IEEDEDEDSK NESSLLHNQK KAPKPDNKLF  60
FSSGPSKSSM STESDVESDR KIFQFESSKE IQVQHDSRAT ATLETETEFS KDARAIRERA  120
LKQAEEALKG KNPSSGNEKL YKGIHGYTDH KAGFRREQTI SSEKAGGAHG PLRASAHIRV  180
SARFDYQPDI CKDYKETGYC GYGDACKFMH DRGDYKPGWQ LEKEWEEAEK IRKRNLALGE  240
DEGGVEQSDE EEDDDDDSLP FACFICRQPF VDPVVTKCKH YFCEHCALKH HAKNKKCFVC  300
NQPTLGIFNT AHEIRKKMAA EGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.11e-154C3H family protein