PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687270.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TALE

Protein Properties

Length: 367aa MW: 41998 Da PI: 6.5168

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687270.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.3e-09	294	329	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_021687270.1 294 YKWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 329 4679*****************************885 PP
2	ELK	37.9	3.8e-13	249	270	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sLkqE+s XP_021687270.1 249 ELKNHLLRKYSGYLSSLKQELS 270 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MEDYNQMNEN TTPRGNFLYA SPVLAPNSSP YARTSSGSNV SNQQTQTPLS PFHLQSSECF 60 QSEGHPIVKT EASTSQHAPK FHYPLLRGHQ TLNQHQGNES SGEVEAIKAK IIAHPQYSNL 120 LEAYMDCQKV GAPPEVAARL AAARQEFQSK QRSSVTSRDT LKDPELDQFM EAYCDMLLKY 180 REELTRPIQE AMDFMRRIET QLNMICNGPL RIFNSDEKSE GVGSSEEDQE NSGGETELPE 240 IDPRAEDREL KNHLLRKYSG YLSSLKQELS KKKKKGKLPK EARQKLLSWW ELHYKWPYPS 300 ETEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLHPQNAA LYMEGHYIGD 360 GPYRLGP

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MEDYNQMNEN TTPRGNFLYA SPVLAPNSSP YARTSSGSNV SNQQTQTPLS PFHLQSSECF  60
QSEGHPIVKT EASTSQHAPK FHYPLLRGHQ TLNQHQGNES SGEVEAIKAK IIAHPQYSNL  120
LEAYMDCQKV GAPPEVAARL AAARQEFQSK QRSSVTSRDT LKDPELDQFM EAYCDMLLKY  180
REELTRPIQE AMDFMRRIET QLNMICNGPL RIFNSDEKSE GVGSSEEDQE NSGGETELPE  240
IDPRAEDREL KNHLLRKYSG YLSSLKQELS KKKKKGKLPK EARQKLLSWW ELHYKWPYPS  300
ETEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLHPQNAA LYMEGHYIGD  360
GPYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-143	TALE family protein