PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687190.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 472aa MW: 51953.8 Da PI: 7.7759

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.8	0.00017	126	148	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg+s+++ ++ H ++ XP_021687190.1 126 FECPICGQSYKSEEEVSMHVESC 148 89***************998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MDDMKDKFKG FMKKVNTQLS SSSSSKFKGQ GRVLGSSSSS SSGPTNPIHA RYCQPVNPKS 60 TPNRSSLNSS SNSKPLPQKS PNSDQNKPAS LNNSNPNRKP TDGFDPFDSL ITTGKRSQNG 120 YSLNVFECPI CGQSYKSEEE VSMHVESCAN NNSKYSVDEG NGMGASSGGE LQASAGAYLS 180 GKPPEGAVEV VLRLFRNIVK EPGNAKFRKI RMGNPKIREA VSDVAGGVEL LECVGLELKE 240 EGGEMWAVME VPNEERIRSI NEVVGLLEPR KVEEQVQKVE DKPSVVPAGT GEQVEPKKID 300 RQIRVFFSVP ESVAAKIELP DSFYNLSPEE LKREADARKK KIAESQLLIP KSYKEKQAKA 360 ARKRYRRTLI RIQFPDGVVL QGVFAPWETT SALYEFVSTS LKEPGLEFEL LDPVLVKRRV 420 IPHFPAAGER ASTLEDEDLV PSALIKFRPV ETDSSVFTGL CNELLEIIEP LN

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MDDMKDKFKG FMKKVNTQLS SSSSSKFKGQ GRVLGSSSSS SSGPTNPIHA RYCQPVNPKS  60
TPNRSSLNSS SNSKPLPQKS PNSDQNKPAS LNNSNPNRKP TDGFDPFDSL ITTGKRSQNG  120
YSLNVFECPI CGQSYKSEEE VSMHVESCAN NNSKYSVDEG NGMGASSGGE LQASAGAYLS  180
GKPPEGAVEV VLRLFRNIVK EPGNAKFRKI RMGNPKIREA VSDVAGGVEL LECVGLELKE  240
EGGEMWAVME VPNEERIRSI NEVVGLLEPR KVEEQVQKVE DKPSVVPAGT GEQVEPKKID  300
RQIRVFFSVP ESVAAKIELP DSFYNLSPEE LKREADARKK KIAESQLLIP KSYKEKQAKA  360
ARKRYRRTLI RIQFPDGVVL QGVFAPWETT SALYEFVSTS LKEPGLEFEL LDPVLVKRRV  420
IPHFPAAGER ASTLEDEDLV PSALIKFRPV ETDSSVFTGL CNELLEIIEP LN