PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686985.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 353aa MW: 40872.2 Da PI: 6.5108

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.4	4.5e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kkv++++++l +vik+vd+yk+ePwdL++ ++ + +++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_021686985.1 7 VPPGFRFHPTDEELVDYYLRKKVNSRRIDL-DVIKDVDLYKIEPWDLQEicRIGTeDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 100 69**************************.9***********954555552555******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k+ l+g++ktLvfykgrap+g+k+dW+mheyrle XP_021686985.1 101 YS-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .8899****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MNTFSHVPPG FRFHPTDEEL VDYYLRKKVN SRRIDLDVIK DVDLYKIEPW DLQEICRIGT 60 EDQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETDEN GTAHQEEGWV VCRVFKKRIT TVRKASEHES SSWYDDQVSF 180 MHEEDSPNQN SQPELAYHLS YSCKKELDLQ YHNQVASSHD HFLQLPLLQS PKLLKAATVY 240 GLDINQASTL QSSSLSQEEQ TRDQSLHSLY GHQNNNGQAV DPVTDWRVLD KFVASQLSQD 300 DLPKENNTYS NATNNIFHSS DQTNMLARHL SKQETTPENA STSTSGCQIE LWK

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MNTFSHVPPG FRFHPTDEEL VDYYLRKKVN SRRIDLDVIK DVDLYKIEPW DLQEICRIGT  60
EDQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETDEN GTAHQEEGWV VCRVFKKRIT TVRKASEHES SSWYDDQVSF  180
MHEEDSPNQN SQPELAYHLS YSCKKELDLQ YHNQVASSHD HFLQLPLLQS PKLLKAATVY  240
GLDINQASTL QSSSLSQEEQ TRDQSLHSLY GHQNNNGQAV DPVTDWRVLD KFVASQLSQD  300
DLPKENNTYS NATNNIFHSS DQTNMLARHL SKQETTPENA STSTSGCQIE LWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-117	NAC family protein