PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686929.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GRF

Protein Properties

Length: 342aa MW: 38415.3 Da PI: 8.7584

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.5	2.7e-24	78	121	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d++pgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e XP_021686929.1 78 DPDPGRCRRTDGKKWRCSKEAHPDSKYCERHMHRGRNRSRKHVE 121 79****************************************97 PP
2	QLQ	61.4	2.4e-21	12	47	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+FT++Q+q+L++Q+l+yKy+++++P+PpeL+ ++ XP_021686929.1 12 SPFTPTQWQELENQALIYKYMVSGVPIPPELIYSVK 47 89*****************************87665 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MMLNATNTRN GSPFTPTQWQ ELENQALIYK YMVSGVPIPP ELIYSVKRSL ESSLASRLFP 60 HQPIGWGCFQ VGFGRKADPD PGRCRRTDGK KWRCSKEAHP DSKYCERHMH RGRNRSRKHV 120 ELASTTTSTA ATTAVTTPSP SIYRNLSTTT SPSASSYSFS PLSSVTEPEF HVHQNPSQST 180 ILNPFHYPHS SSSRHPGSGF STQNSTTHNL FLGSGSSHTD KDYRYLHGMR EGLDERAFFP 240 EDSGSVRTLQ DTYQQQAMSS CKGYSQSQFE SLADSSKKQE EQQQHCFVLG TDFKSSSTRS 300 IKLEKESETQ KSLHHFFGDW PPKNSDSWLD LASSSRLHTA DS

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MMLNATNTRN GSPFTPTQWQ ELENQALIYK YMVSGVPIPP ELIYSVKRSL ESSLASRLFP  60
HQPIGWGCFQ VGFGRKADPD PGRCRRTDGK KWRCSKEAHP DSKYCERHMH RGRNRSRKHV  120
ELASTTTSTA ATTAVTTPSP SIYRNLSTTT SPSASSYSFS PLSSVTEPEF HVHQNPSQST  180
ILNPFHYPHS SSSRHPGSGF STQNSTTHNL FLGSGSSHTD KDYRYLHGMR EGLDERAFFP  240
EDSGSVRTLQ DTYQQQAMSS CKGYSQSQFE SLADSSKKQE EQQQHCFVLG TDFKSSSTRS  300
IKLEKESETQ KSLHHFFGDW PPKNSDSWLD LASSSRLHTA DS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-65	GRF family protein