PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021686557.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 236aa MW: 27182.2 Da PI: 9.4597 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.7 | 1.1e-31 | 23 | 73 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey++ XP_021686557.1 23 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYCN 73 79***********************************************95 PP | |||||||
2 | K-box | 109.6 | 3.4e-36 | 90 | 187 | 3 | 100 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +s+++s +e +a+++qqe+akL+++i++Lq+++Rhl+G++L+sL++keL+qLe++Le+++++iRskK+elll++ie+lqk+e el++e +Lr+k XP_021686557.1 90 SSNTSSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENESVCLRTK 184 455566999************************************************************************************** PP K-box 98 lee 100 ++e XP_021686557.1 185 IAE 187 986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MAYIHLFYVS FEVGMGRGKI EIKRIENTTN RQVTFCKRRN GLLKKAYELS VLCDAEVALI 60 VFSSRGRLYE YCNNNIKSTI ERYKKACSDS SNTSSITEIN AQYYQQESAK LRQQIQMLQN 120 SNRHLMGDSL SSLTVKELKQ LENRLERGIT RIRSKKHELL LAEIEYLQKR EIELENESVC 180 LRTKIAEIER LQQANMVTGA ELNAIQALTS RNFFGPHMIE GGTAYSHPDK KILHLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.1 | 1e-124 | MIKC_MADS family protein |