PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686538.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 1073aa MW: 118484 Da PI: 8.493

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.5	1.2e-40	148	225	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dl++ak+yhrrhkvCevhsk++++lv +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ XP_021686538.1 148 MCQVDNCKEDLTSAKDYHRRHKVCEVHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 225 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1073 aa Download sequence
MEELGAQVAP PIFIHQALSS RFCDATSMAK KRDLSYQTPN FQLQQQHRFV PNPRDNWNPK 60 AWNWDSIRFV AKPSDADTNA LQLGSATLEP KKKTEASGNH LPLKKAAVDE DDGLRLNLAG 120 GLNSVEEPVS RPNKRVRSGS PGTATYPMCQ VDNCKEDLTS AKDYHRRHKV CEVHSKSTKA 180 LVGKQMQRFC QQCSRFHPLS EFDEGKRSCR RRLAGHNRRR RKTQPEDVTS RLLLPGNRDS 240 SGNANLDIVN LLTALARTQG ENEGKIINNA PVPDRDQLIQ ILSKINSLPL PMDLAAKLSN 300 IKSLNRKNPE QPLSDLQNGL LGTTSSPSTM DLLAVLSATL TASAPDALAI LSQRSSQSSD 360 SEKSKSTCPD QATGHNLQNR PIVEFPSVGG ERNSSCYQSP VKDSDYRLQE SCPNLPLQLF 420 SSSPEDNSPP KLASSRKYFS SGSSNPSEGR SPSSSPPLMQ RLFPLQSTAE TVKSEKMSIS 480 REVNANAEGS RTHGCVVPLE LFRDSNGGAD QSSFQTFPYQ AGYTSSSGSD HSPSSQNSDA 540 QDRSGRIIFK LFDKDPSHFP GKLRAQIYNW LSNSPSEMES YIRPGCVVLS VYLSMSSATW 600 DQLERNLLQQ VYSLVQDSES DFWRSGRFLL HTSRQLASHK DGNIRLCKSW RTWSSPELIS 660 VSPLAVVGGQ ETSLLLRGRN LTNPGTKIHC TYMGGYTSMD VIGSTSPGAM YDEINVNGFK 720 IHGASSSVLG RCFIEVENGF KGNSFPVIIA NATICKELRL LESEFDEGAK DSDIISEEQA 780 QCLDRPRSRE EVLHFLNELG WLFQRRKVSS MFKLPDYSLR RFKFLLIFSV ERDYCVLVKT 840 ILDMLVERNL DMSGLSKESL EMLSEIQLVN RAVKRKCRKM VDLLIHYSIN GSDVSSKKYI 900 FPPNLAGPGG ITSLHLAACT SGSEELVDAL TNDPQEIGLS CWSSLLDANS QSPYAYAVMT 960 NNHSYNTMVA RKLADKRNGQ VSVIVGNEMG QPSSSGMTSN FQQGRGSCAK CAAVAAKYNR 1020 RVMGSQGLLQ RPYVHSMLAI AAVCVCVCLF LRGAPDIGLV APFKWENLDY GTI

Sequence ? help Back to Top

Protein Sequence Length: 1073 aa Download sequence

MEELGAQVAP PIFIHQALSS RFCDATSMAK KRDLSYQTPN FQLQQQHRFV PNPRDNWNPK  60
AWNWDSIRFV AKPSDADTNA LQLGSATLEP KKKTEASGNH LPLKKAAVDE DDGLRLNLAG  120
GLNSVEEPVS RPNKRVRSGS PGTATYPMCQ VDNCKEDLTS AKDYHRRHKV CEVHSKSTKA  180
LVGKQMQRFC QQCSRFHPLS EFDEGKRSCR RRLAGHNRRR RKTQPEDVTS RLLLPGNRDS  240
SGNANLDIVN LLTALARTQG ENEGKIINNA PVPDRDQLIQ ILSKINSLPL PMDLAAKLSN  300
IKSLNRKNPE QPLSDLQNGL LGTTSSPSTM DLLAVLSATL TASAPDALAI LSQRSSQSSD  360
SEKSKSTCPD QATGHNLQNR PIVEFPSVGG ERNSSCYQSP VKDSDYRLQE SCPNLPLQLF  420
SSSPEDNSPP KLASSRKYFS SGSSNPSEGR SPSSSPPLMQ RLFPLQSTAE TVKSEKMSIS  480
REVNANAEGS RTHGCVVPLE LFRDSNGGAD QSSFQTFPYQ AGYTSSSGSD HSPSSQNSDA  540
QDRSGRIIFK LFDKDPSHFP GKLRAQIYNW LSNSPSEMES YIRPGCVVLS VYLSMSSATW  600
DQLERNLLQQ VYSLVQDSES DFWRSGRFLL HTSRQLASHK DGNIRLCKSW RTWSSPELIS  660
VSPLAVVGGQ ETSLLLRGRN LTNPGTKIHC TYMGGYTSMD VIGSTSPGAM YDEINVNGFK  720
IHGASSSVLG RCFIEVENGF KGNSFPVIIA NATICKELRL LESEFDEGAK DSDIISEEQA  780
QCLDRPRSRE EVLHFLNELG WLFQRRKVSS MFKLPDYSLR RFKFLLIFSV ERDYCVLVKT  840
ILDMLVERNL DMSGLSKESL EMLSEIQLVN RAVKRKCRKM VDLLIHYSIN GSDVSSKKYI  900
FPPNLAGPGG ITSLHLAACT SGSEELVDAL TNDPQEIGLS CWSSLLDANS QSPYAYAVMT  960
NNHSYNTMVA RKLADKRNGQ VSVIVGNEMG QPSSSGMTSN FQQGRGSCAK CAAVAAKYNR  1020
RVMGSQGLLQ RPYVHSMLAI AAVCVCVCLF LRGAPDIGLV APFKWENLDY GTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein