PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021686229.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 238aa MW: 27544.9 Da PI: 9.5005 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.1 | 3.1e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss XP_021686229.1 9 KRIENAASRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 71.3 | 3e-24 | 85 | 178 | 9 | 97 |
K-box 9 leeakaeslqqelakLkkeienLq.....reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++++ ++++++ L k+ie L+ + R+llG++Le++s+ eLqqLe+qLe+sl++iR++Kn+l++e+ie+l++ ek l eenk+L++k XP_021686229.1 85 TSQENLQNMKEDTFSLAKKIELLEvskflEICRKLLGDGLEPCSIDELQQLESQLERSLTRIRTRKNQLFTEKIEKLREEEKILMEENKRLQAK 178 68899*******************99888778***********************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MVRGKTQMKR IENAASRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSC 60 RFFSINKTIE RYQKKAKDLG ISIKTSQENL QNMKEDTFSL AKKIELLEVS KFLEICRKLL 120 GDGLEPCSID ELQQLESQLE RSLTRIRTRK NQLFTEKIEK LREEEKILME ENKRLQAKCG 180 LQPMDLSTTT IKEQHVADRQ SMEVETELFI GPQIANRKNM EVGTELFIGP PETRTSFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11880.1 | 8e-63 | MIKC_MADS family protein |