PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021685711.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 350aa    MW: 39546.6 Da    PI: 8.3677
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021685711.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.19.9e-062849426
                    ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  4 elCrffartGtCkyGdrCkFaHg 26
                    + C+f+ + G C y ++CkF H+
  XP_021685711.1 28 RVCKFWVK-GKCAYKNNCKFLHS 49
                    78******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MIERNARRKD THQTRKSFQN QLRKPLQRVC KFWVKGKCAY KNNCKFLHSW FQSGNGFSML  60
ARLERHKKSV VGVALSLASD KLYTGSRDGT VRVWDCNSGK CDHVINLGFE IGSLICEGSW  120
VFIGLPNVVR VWNLSLEEFC LDGPIGQVYA LAVYKDLLFA GTANGDILVW EGSFEANPFA  180
MVAPLRELKK AVVCLNIGSG VNSLYSGSMD NTVKVWDLET VQCKQTLNGH KDVVMSLLSW  240
DQCLLTYSLD HTMKFWIARE GGKLEPPVDM HEEKSGILKV FGMQDAKGRP IVLCSCNDNC  300
VHLYELDSFN EMDRIFAENK VREIQRGPNG LFFTGDAARV VTVLMWQQNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.11e-115C3H family protein