PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021685492.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | TCP | ||||||||
Protein Properties | Length: 347aa MW: 37956.7 Da PI: 6.632 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 116.1 | 4.5e-36 | 20 | 116 | 2 | 88 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.................ssssaseceaesss 79 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l+++ + +a+ss+ XP_021685492.1 20 TGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELppwhplanntngtmeadQ-------NAGSSE 107 79**************************************************************776666544333222221.......112222 PP TCP 80 ssasnsssg 88 + +++s++ XP_021685492.1 108 MAIAEQSES 116 222222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence |
MKGAGGEIVQ VQGGHIVRST GRKDRHSKVY TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD 60 RPSKAVDWLI KKAKSAIDKL AELPPWHPLA NNTNGTMEAD QNAGSSEMAI AEQSESSGYS 120 FQLHRHLADN PSNGSSFITP SIDPDAIPDT MKSLFPTSST TSSMNFQGYP PDIISRTTNH 180 TEDLGLSLHC FQDQGLIRGQ SQADTSHAPS NDQNLFAGSA PVGYEANFQR MVAWSNNTST 240 ENRTDGGFAF NSPQMPPPQT LLGQDQAFSQ RGPLQSSFAQ SIRAWNDLTM ASADHHRTQE 300 IHQSFIFGSR FASEGLPGFS IPTRIHGEEE QSIVSDKPSS SSPNSQH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 2e-81 | TCP family protein |