PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021684970.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 250aa    MW: 28787.5 Da    PI: 5.0131
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021684970.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260130.66.4e-41131121100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     aCaaCk++rrkCa+dC+lapyfp++++++f n+hklFG+sn++k++k+l++ ++++am+++++++++ra+dPv G++++i++lq+q+e +kael+
  XP_021684970.1  13 ACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKNLNQPDKDEAMRTIIFQSDVRANDPVGGCYRIIRELQRQIEYHKAELD 107
                     7*********************************************************************************************9 PP

          DUF260  96 llkee 100
                     l+ ++
  XP_021684970.1 108 LVLHQ 112
                     98776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MSITRIGNGT AQACAACKYQ RRKCAPDCIL APYFPHDRQR QFLNAHKLFG VSNITKIIKN  60
LNQPDKDEAM RTIIFQSDVR ANDPVGGCYR IIRELQRQIE YHKAELDLVL HQLAICRAQA  120
QQQTHFQMLE TNDSTTLGCE ILNPDSLDIY DPTMIQYHYP QTQEEEQEIV VQDHNQKLQE  180
DVNEALHIQD STDHVVSSSS LPSMHDLKQP FVNEFDNDIK PLLDINDVKF EPEELVERKF  240
VPLTQLVISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.13e-66LBD family protein