PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021684784.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 768aa    MW: 83792 Da    PI: 6.0967
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021684784.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.42.8e-1991146156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e++F+++++p+ ++r+eL+++lgL+  q+k+WFqN+R+++k
  XP_021684784.1  91 KKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQIKFWFQNKRTQMK 146
                     688999***********************************************999 PP
2START221.62.5e-692805001206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++elv++a+ +ep+W++s      ++n++e++++f+++ +     ++ ea+r+++vv+m++ +lve l+d++ qW++ +     +a+tl
  XP_021684784.1 280 ELAVAAMEELVRMAQMGEPLWMSSLdgtnAILNEEEYIRIFPRGIGpkpisFKCEASRETAVVIMNHINLVEYLMDVN-QWSTIFSgivsRAMTL 373
                     57899**********************999*************999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m+ae+q+++plvp R++++vRy++q+ ag+w++vdvS+d+ ++ p  +s+ R   +pSg+li++++ng+skvtwvehv
  XP_021684784.1 374 EVLSTGvagncnGALQVMTAEFQLPTPLVPtRESYYVRYCKQHAAGTWAVVDVSLDNLRPSP-AASCRR---RPSGCLIQEMPNGYSKVTWVEHV 464
                     *************************************************************9.566555...*********************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+wvatl+rqce+
  XP_021684784.1 465 EVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCER 500
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 768 aa     Download sequence    
MPAGVMVPAR NMPSMIGTNG NVSGFGSSSG LTLGQPNMME DQLHHLDMTQ NISESDLARI  60
RDHEFDSTNT KSGSDNHDGA SGDDQDPRPK KKRYHRHTQR QIQEMEAFFK ECPHPDDKQR  120
KELSRELGLE PLQIKFWFQN KRTQMKTQHE RHENSQLRAE NDKLRADNMT YREALSNASC  180
PSCGGPTAIG EMSFDEHQLR LENARLREEI DRISAIAAKY VGKPVVNYPL LSAPMPPRPL  240
ELGVGNFGAQ PGMGGEMYGA GDLLRSIGAH SEADKPMIIE LAVAAMEELV RMAQMGEPLW  300
MSSLDGTNAI LNEEEYIRIF PRGIGPKPIS FKCEASRETA VVIMNHINLV EYLMDVNQWS  360
TIFSGIVSRA MTLEVLSTGV AGNCNGALQV MTAEFQLPTP LVPTRESYYV RYCKQHAAGT  420
WAVVDVSLDN LRPSPAASCR RRPSGCLIQE MPNGYSKVTW VEHVEVDDRG VHNLYKQLVS  480
SGHAFGAKRW VATLDRQCER LASAMATNIP SGDIGVITNP EGRKSMLKLA ERMAISFFGG  540
VSASTAHTWT TLSGTGADDV RVTTRKSVDD PGRPPGIVLS AATSFWLPVP PKRVFDFLRD  600
ENSRNEPHYS CLQWDILSNG GVVQEMAHIA NGRDTGNCVS LLRVNSANSS QSNMLILQES  660
CTDQTASFVI YAPVDTVAMN VLLNGGDPDY MALLPSGFAI LPDGTTTTHG GGIGELGSAG  720
GSLLTVAFQI LVDSVPTAKL SLGSVATVNN LIACTVERIK AALSCESI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein