PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021684740.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 483aa MW: 53089.6 Da PI: 8.9063

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021684740.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.3e-05	60	80	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H XP_021684740.1 60 CEICGKGFQRDQNLQLHRRGH 80 *******************88 PP
2	zf-C2H2	13.4	0.00022	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_021684740.1 134 WKCEKCSKRYAVQSDWKAHSKTC 156 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MLEKMAEEAI SSNDFVQNPV GGSNPPAVKK KRNLPGTPDP EAEVVALSPK TLMATNRFLC 60 EICGKGFQRD QNLQLHRRGH NLPWKLKQRT TKEARKRVYV CPEKTCVHHH PSRALGDLTG 120 IKKHFCRKHG EKKWKCEKCS KRYAVQSDWK AHSKTCGTRE YKCDCGTLFS RRDSFITHRA 180 FCDALAEETA RVNAAASINS LAAAATSFNY HHLMGTPTRP NMEQHFSSIF KPISSNDLTI 240 DQTRRGLSLW VSQGPPGDHH EVIGNNSIQE IHQLGSMGSS GGIFCNPLVS SLNPSPSHHY 300 QLNWPLFGNK LSSSNAHEEL TSTNTLPLNN VKEATAVQLV SVPSLYSTQQ QSYQTTSAAN 360 MSATALLLKA AQIGATSTDP SFLGSFGLKC SSNNSQFHHE GNKFCGLYGS NPISTCTTNL 420 PSEVENSSGN DISSLNELQT YPTTKRQKTR SDHQDATGGQ TRDFLGVGVQ QAICHPSPIN 480 GWI

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MLEKMAEEAI SSNDFVQNPV GGSNPPAVKK KRNLPGTPDP EAEVVALSPK TLMATNRFLC  60
EICGKGFQRD QNLQLHRRGH NLPWKLKQRT TKEARKRVYV CPEKTCVHHH PSRALGDLTG  120
IKKHFCRKHG EKKWKCEKCS KRYAVQSDWK AHSKTCGTRE YKCDCGTLFS RRDSFITHRA  180
FCDALAEETA RVNAAASINS LAAAATSFNY HHLMGTPTRP NMEQHFSSIF KPISSNDLTI  240
DQTRRGLSLW VSQGPPGDHH EVIGNNSIQE IHQLGSMGSS GGIFCNPLVS SLNPSPSHHY  300
QLNWPLFGNK LSSSNAHEEL TSTNTLPLNN VKEATAVQLV SVPSLYSTQQ QSYQTTSAAN  360
MSATALLLKA AQIGATSTDP SFLGSFGLKC SSNNSQFHHE GNKFCGLYGS NPISTCTTNL  420
PSEVENSSGN DISSLNELQT YPTTKRQKTR SDHQDATGGQ TRDFLGVGVQ QAICHPSPIN  480
GWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	1e-145	C2H2 family protein