PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021684524.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 237aa MW: 25776.3 Da PI: 8.4763 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 129.9 | 1.1e-40 | 41 | 140 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+Ca++C+++pyf ++p+kfa+vhk+FGasnv+k+l ++pe++r d+++slv+eA+ r+rdPvyG++g i+ lqqq+++l+ae++ XP_021684524.1 41 PCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPESQRADTANSLVFEANLRLRDPVYGCMGAISVLQQQIQSLQAEIN 135 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_021684524.1 136 SVRAE 140 99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MSRDRDRFDE IGKKIRRDTD LSSQMGRRHI LIPGILNTVT PCAACKLLRR RCAEECPFSP 60 YFSPHEPQKF AAVHKVFGAS NVSKMLMEVP ESQRADTANS LVFEANLRLR DPVYGCMGAI 120 SVLQQQIQSL QAEINSVRAE IIKYKYREAN TNIISSTEHH HPAALVSSGD LSSISAPAPQ 180 PLPPLSSPPP PPPPPPPTTA SIVVSSSSSS SISSLYTPPT SSTGYSSISS VNVPYFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40470.1 | 8e-73 | LBD family protein |