PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021684524.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 237aa    MW: 25776.3 Da    PI: 8.4763
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021684524.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.91.1e-40411401100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++C+++pyf  ++p+kfa+vhk+FGasnv+k+l ++pe++r d+++slv+eA+ r+rdPvyG++g i+ lqqq+++l+ae++
  XP_021684524.1  41 PCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPESQRADTANSLVFEANLRLRDPVYGCMGAISVLQQQIQSLQAEIN 135
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_021684524.1 136 SVRAE 140
                     99987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MSRDRDRFDE IGKKIRRDTD LSSQMGRRHI LIPGILNTVT PCAACKLLRR RCAEECPFSP  60
YFSPHEPQKF AAVHKVFGAS NVSKMLMEVP ESQRADTANS LVFEANLRLR DPVYGCMGAI  120
SVLQQQIQSL QAEINSVRAE IIKYKYREAN TNIISSTEHH HPAALVSSGD LSSISAPAPQ  180
PLPPLSSPPP PPPPPPPTTA SIVVSSSSSS SISSLYTPPT SSTGYSSISS VNVPYFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40470.18e-73LBD family protein