PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021684391.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 432aa MW: 46438 Da PI: 6.8326

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021684391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.1	1.8e-35	36	157	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++++ +++ + ++++ + ++++ + XP_021684391.1 36 GRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWHPTTAtTTATTQTGIQQDQLTdqrdnrlp 130 89*************************************************************54444322222222222222222222233455 PP TCP 89 ..........................k 89 XP_021684391.1 131 menlavvggsggvstrtvaaatttiaT 157 666666666666666666555555551 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MGESHQQAAA SSRLGTRNTG GEIVEVQGGH IVRSIGRKDR HSKVCTAKGP RDRRVRLSAH 60 TAIQFYDVQD RLGYDRPSKA VDWLIKKAKA AIDELAELPA WHPTTATTTA TTQTGIQQDQ 120 LTDQRDNRLP MENLAVVGGS GGVSTRTVAA ATTTIATAAT MGADIQNMEQ QQHLAENPNN 180 SSGFLPLSLD SDAIADTIKS FFPMGASAET SSASIHFQNY PPDLLSRTSS QNQDLRLSLQ 240 SFQEPILLQQ SHHGHTQNEQ QVLLSGTAHD LGFDGGSSAG WSEHHQHHSA EISRFQRMVA 300 WNVGGAAETG SGGANGSGGF IFNPTLSQTV LPPPLSQPFF GQNQFFSQRG TLQSSITPSV 360 RAWIDPGITS NHHQHNQIPQ IHQQQSSISG GGFTASVAGF SGFRVPARIQ GEEEEHDGIH 420 NKPSSASSDS RH

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MGESHQQAAA SSRLGTRNTG GEIVEVQGGH IVRSIGRKDR HSKVCTAKGP RDRRVRLSAH  60
TAIQFYDVQD RLGYDRPSKA VDWLIKKAKA AIDELAELPA WHPTTATTTA TTQTGIQQDQ  120
LTDQRDNRLP MENLAVVGGS GGVSTRTVAA ATTTIATAAT MGADIQNMEQ QQHLAENPNN  180
SSGFLPLSLD SDAIADTIKS FFPMGASAET SSASIHFQNY PPDLLSRTSS QNQDLRLSLQ  240
SFQEPILLQQ SHHGHTQNEQ QVLLSGTAHD LGFDGGSSAG WSEHHQHHSA EISRFQRMVA  300
WNVGGAAETG SGGANGSGGF IFNPTLSQTV LPPPLSQPFF GQNQFFSQRG TLQSSITPSV  360
RAWIDPGITS NHHQHNQIPQ IHQQQSSISG GGFTASVAGF SGFRVPARIQ GEEEEHDGIH  420
NKPSSASSDS RH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-99	TCP family protein