PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021683852.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 196aa    MW: 21400.3 Da    PI: 5.1993
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021683852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260137.64.4e-43341331100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l+a+la
  XP_021683852.1  34 PCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKQVNELQAQLA 128
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_021683852.1 129 KAQAE 133
                     *9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MEHSEATNSN TNSSSPSSSS SPPSPPMPPV VISPCAACKI LRRRCAEKCV LAPYFPPTEP  60
AKFTIAHRVF GASNIIKFLQ ELPESQRADA VSSMVYEASA RIRDPVYGCA GAICHLQKQV  120
NELQAQLAKA QAELVNMQCQ QANLVALLCM EMAQSPQQLS EQSVDNFIST PQSYQSNPCF  180
VDDSNNLGPL WEPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.16e-66LBD family protein