PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683821.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 782aa MW: 86629.3 Da PI: 6.2917

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683821.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.4	6.3e-24	156	257	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD v+F + ++ XP_021683821.1 156 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL--RGEN 247 99**************************963.3445679********************************************..4499 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+++++r+ XP_021683821.1 248 GELRLGIRRA 257 999**996 PP
2	Auxin_resp	122.2	3.8e-40	282	363	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +a+a+st+++F+v+Y+Pras++eFvv+++k++k++ ++v++G+Rfkm+fe++ds+err+sG+++ +sdldp+rWpnSkWr+L XP_021683821.1 282 VANAISTNKMFNVLYSPRASNAEFVVPYKKYMKSIMNPVCIGTRFKMRFEMDDSPERRCSGVITEISDLDPYRWPNSKWRCL 363 689******************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 782 aa Download sequence
MEIDLNHAVT EAEKYAFCTN GDSSSSSCSS NSSPSPASSS IYLELWHACA GPLTSLPKKG 60 NVVVYFPQGH LEQVASSAPI SPTEMPTFDL QPQIFCKVVN VQLLANKDND EVYTQLTLLP 120 QPELVGQNLE GKGLEDLGVD EEGGGGLPAK STPHMFCKTL TASDTSTHGG FSVPRRAAED 180 CFPPLDYKQQ RPSQELVAKD LHGVEWRFRH IYRGQPRRHL LTTGWSIFVS QKNLVSGDAV 240 LFLRGENGEL RLGIRRAVRP RNGLPDSAIG KQNSYPSILS LVANAISTNK MFNVLYSPRA 300 SNAEFVVPYK KYMKSIMNPV CIGTRFKMRF EMDDSPERRC SGVITEISDL DPYRWPNSKW 360 RCLMVRWDED IGGDHQERVS PWEIDPSVSL PPLSVQSSPR LKKLRTGLSA TPPDNPITGG 420 GGFLDFEESG RSSKVLQGQE NVGFMSPLYG CDTLNRPPDF EMQNSAHQNL VSTGREKANN 480 GEITRARSTT YTGFAESNRF PKVLQGQEIC PMRSLTGKSD FNLGAWGKTN LGCGPFDIYQ 540 APRPNFYPLA AESMQNMYFP YGDLYKTGQD PRMRSYTANF PRENFQFGAS SIQTARDEAG 600 KSNQLNDHKS QETISAPPAL GVNLMNQKDN SFNGTASSCK LFGFSLTVEA TNPNSQNSGK 660 RSCTKVHKQG SLVGRAIDLS RLNGYSDLLG ELERLFSMEG LLRDPNKGWR ILYTDSENDV 720 MVVGDDPWHE FCNVVSKIHI YTQDEVEKMT ICDDTQSCLD QAYVVMEASK SSSVGQPDFS 780 PQ

Sequence ? help Back to Top

Protein Sequence Length: 782 aa Download sequence

MEIDLNHAVT EAEKYAFCTN GDSSSSSCSS NSSPSPASSS IYLELWHACA GPLTSLPKKG  60
NVVVYFPQGH LEQVASSAPI SPTEMPTFDL QPQIFCKVVN VQLLANKDND EVYTQLTLLP  120
QPELVGQNLE GKGLEDLGVD EEGGGGLPAK STPHMFCKTL TASDTSTHGG FSVPRRAAED  180
CFPPLDYKQQ RPSQELVAKD LHGVEWRFRH IYRGQPRRHL LTTGWSIFVS QKNLVSGDAV  240
LFLRGENGEL RLGIRRAVRP RNGLPDSAIG KQNSYPSILS LVANAISTNK MFNVLYSPRA  300
SNAEFVVPYK KYMKSIMNPV CIGTRFKMRF EMDDSPERRC SGVITEISDL DPYRWPNSKW  360
RCLMVRWDED IGGDHQERVS PWEIDPSVSL PPLSVQSSPR LKKLRTGLSA TPPDNPITGG  420
GGFLDFEESG RSSKVLQGQE NVGFMSPLYG CDTLNRPPDF EMQNSAHQNL VSTGREKANN  480
GEITRARSTT YTGFAESNRF PKVLQGQEIC PMRSLTGKSD FNLGAWGKTN LGCGPFDIYQ  540
APRPNFYPLA AESMQNMYFP YGDLYKTGQD PRMRSYTANF PRENFQFGAS SIQTARDEAG  600
KSNQLNDHKS QETISAPPAL GVNLMNQKDN SFNGTASSCK LFGFSLTVEA TNPNSQNSGK  660
RSCTKVHKQG SLVGRAIDLS RLNGYSDLLG ELERLFSMEG LLRDPNKGWR ILYTDSENDV  720
MVVGDDPWHE FCNVVSKIHI YTQDEVEKMT ICDDTQSCLD QAYVVMEASK SSSVGQPDFS  780
PQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60450.1	0.0	ARF family protein