PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683776.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 380aa MW: 43010.9 Da PI: 6.6428

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683776.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.9	3.4e-15	73	132	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ k+ ++++lg ++ +e Aa ++ a++k++g XP_021683776.1 73 SIYRGVTRHRWTGRFEAHLWDkSSWNNiqnKKgRQVYLGAYDNEEAAAHTYDLAALKYWG 132 57*****************777799977447***********************98 PP
2	AP2	31.3	5.1e-10	175	234	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkf.......gtaeeAakaaiaarkklege 56 s+y+GV +++++grW+A+I + g +k+ +lg++ +t eeAa+a++ a+ +++g+ XP_021683776.1 175 SKYRGVARHHQNGRWEARIGRvF---G-NKYLYLGTYiiyfvgkDTQEEAAAAYDMAAIEYRGA 234 89***************9966...3.59999999966666666778***********995 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MKRSPDLSRF SSSSSSSYSS SASSCCLGSD TPLHHHLLRS QKPKSKRARR IQKNQDKCQI 60 NATATSSSRR RSSIYRGVTR HRWTGRFEAH LWDKSSWNNI QNKKGRQVYL GAYDNEEAAA 120 HTYDLAALKY WGPDTTLNFP IKSYSKELEE MQKMSKEEYL AYLRRRSSGF SRGVSKYRGV 180 ARHHQNGRWE ARIGRVFGNK YLYLGTYIIY FVGKDTQEEA AAAYDMAAIE YRGANAVTNF 240 DTSNYIDRLK MKDVPLSHIL PTDPLSNHSI ESEEAAEPDV EQSPSPSSPL PPQEEQQATS 300 PKLHCELPSC MDTSTMIVME PIEEHELNWS FCLDSGLTPL PVPDLPLENA CELTNLFDDT 360 GFEDNIDLIF DGCCFGNDGN

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MKRSPDLSRF SSSSSSSYSS SASSCCLGSD TPLHHHLLRS QKPKSKRARR IQKNQDKCQI  60
NATATSSSRR RSSIYRGVTR HRWTGRFEAH LWDKSSWNNI QNKKGRQVYL GAYDNEEAAA  120
HTYDLAALKY WGPDTTLNFP IKSYSKELEE MQKMSKEEYL AYLRRRSSGF SRGVSKYRGV  180
ARHHQNGRWE ARIGRVFGNK YLYLGTYIIY FVGKDTQEEA AAAYDMAAIE YRGANAVTNF  240
DTSNYIDRLK MKDVPLSHIL PTDPLSNHSI ESEEAAEPDV EQSPSPSSPL PPQEEQQATS  300
PKLHCELPSC MDTSTMIVME PIEEHELNWS FCLDSGLTPL PVPDLPLENA CELTNLFDDT  360
GFEDNIDLIF DGCCFGNDGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-106	AP2 family protein