PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683476.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 765aa MW: 88851.8 Da PI: 6.8826

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683476.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.8	1.4e-26	44	130	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYAk+vGF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++ +gkw+++++++eHnHel p XP_021683476.1 44 SFYKEYAKSVGFGTAKLSSRRSRASREFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRKPNGKWYIYSFVKEHNHELLP 130 5**************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 765 aa Download sequence
MCQSFWTVDL SISSTVMDSN VTTGSTIYEP RDDMVFDSHE AAYSFYKEYA KSVGFGTAKL 60 SSRRSRASRE FIDAKFSCIR YGNKQQSDDA INPRPSPKIG CKASMHVKRK PNGKWYIYSF 120 VKEHNHELLP AQVHFFRSHR NVDPLKNDAR IRRRKNMTAV SKLFGAYQNV DCLDGYMRNQ 180 HDKGRSLVLQ AGDAQILLEL FMHMQEENPK FFYAVDFNEE HKLRNLFWVD AKGMEDYNNF 240 GDVVYFDTTY FTNKYKIPLV LFIGVNHHIQ PILLGCALIA DETVYTFFWL MQTWFIAMGE 300 RAPRVILTDQ NNAIKTAIGA VFQQSRHCFC LWHILEKIPR QLEYLSPWLD SFMVKFNKCI 360 FKSWTEDQFE KRWWKLLDKF NLREIEWVQS LYEDRKYWVP TFMRDVSFAG LSTTLRSESV 420 SSLFDKYVHW ETSMREFIEQ YKSILEDRYE EEARADFDSW HETPEMKSPS PFEKQMSFVY 480 THEIFKKFQF EVLGAAACHL KKEETEDETT TIYTVKDFED NQNYMVEWNE SKSEICCLCR 540 SFEYKGYLCR HAIVVLQMSG VFRIPPKYVL QRWTNAALSK HAISERLDEV QSKVRRYNDL 600 CRRAIILGEE GSLSEESYNI ALCAIKEALK QCANLNNSVE NGVGPTALVS IEEENQCGST 660 SKDVPDAHSI SANKASRRVE AGKEKENDES NTFRKGKLVP QSGAVNVGVQ DSFHLVEMCD 720 LEAAQSHNMV SAQLQNVVPS VFHSMTSTQF HSMAPSHLPE ARLPR

Sequence ? help Back to Top

Protein Sequence Length: 765 aa Download sequence

MCQSFWTVDL SISSTVMDSN VTTGSTIYEP RDDMVFDSHE AAYSFYKEYA KSVGFGTAKL  60
SSRRSRASRE FIDAKFSCIR YGNKQQSDDA INPRPSPKIG CKASMHVKRK PNGKWYIYSF  120
VKEHNHELLP AQVHFFRSHR NVDPLKNDAR IRRRKNMTAV SKLFGAYQNV DCLDGYMRNQ  180
HDKGRSLVLQ AGDAQILLEL FMHMQEENPK FFYAVDFNEE HKLRNLFWVD AKGMEDYNNF  240
GDVVYFDTTY FTNKYKIPLV LFIGVNHHIQ PILLGCALIA DETVYTFFWL MQTWFIAMGE  300
RAPRVILTDQ NNAIKTAIGA VFQQSRHCFC LWHILEKIPR QLEYLSPWLD SFMVKFNKCI  360
FKSWTEDQFE KRWWKLLDKF NLREIEWVQS LYEDRKYWVP TFMRDVSFAG LSTTLRSESV  420
SSLFDKYVHW ETSMREFIEQ YKSILEDRYE EEARADFDSW HETPEMKSPS PFEKQMSFVY  480
THEIFKKFQF EVLGAAACHL KKEETEDETT TIYTVKDFED NQNYMVEWNE SKSEICCLCR  540
SFEYKGYLCR HAIVVLQMSG VFRIPPKYVL QRWTNAALSK HAISERLDEV QSKVRRYNDL  600
CRRAIILGEE GSLSEESYNI ALCAIKEALK QCANLNNSVE NGVGPTALVS IEEENQCGST  660
SKDVPDAHSI SANKASRRVE AGKEKENDES NTFRKGKLVP QSGAVNVGVQ DSFHLVEMCD  720
LEAAQSHNMV SAQLQNVVPS VFHSMTSTQF HSMAPSHLPE ARLPR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	157	ARIRRRKNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	0.0	FAR1 family protein