PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683364.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 398aa MW: 44922.9 Da PI: 8.3834

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683364.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.9	9.2e-41	166	242	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC++ l +ak+yhrrhkvCe+hskap+v+v gleqrfCqqCsrfh +sefDe krsCrrrLa+hn+rrrk++ XP_021683364.1 166 RCQVEGCQVALVNAKDYHRRHKVCEMHSKAPKVIVLGLEQRFCQQCSRFHVVSEFDEWKRSCRRRLAGHNQRRRKSA 242 6**************************************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MENGANLYTA HSNRDRSQNA NIVWEPNSSR FDWGNSTNGS STFCTAVVAA ATTSAADTIC 60 STHPEATSAH ALMFQRESLY PYHHHDQDYQ QQLSFYGGEG SHFHCDPHLM CLKLGKRHYF 120 EDTMGDRQVG FSINKRGKLY HRVVGSRAGQ YSSAAGGVGP PANVPRCQVE GCQVALVNAK 180 DYHRRHKVCE MHSKAPKVIV LGLEQRFCQQ CSRFHVVSEF DEWKRSCRRR LAGHNQRRRK 240 SARDSDSRNY CQGKFPYVAS TADRALSLLS TKADAWISSD LSTRSSAALR ELIAEHRAVI 300 LARQERHLQH SNAMENFGDH SHPSSNNSFF PYDHQLQVSY EPHNWDRFND TTGTRLTLDL 360 MQAPSSAFCL LSTRGKNNKE EVEECSVLWN TWGGAHVV

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MENGANLYTA HSNRDRSQNA NIVWEPNSSR FDWGNSTNGS STFCTAVVAA ATTSAADTIC  60
STHPEATSAH ALMFQRESLY PYHHHDQDYQ QQLSFYGGEG SHFHCDPHLM CLKLGKRHYF  120
EDTMGDRQVG FSINKRGKLY HRVVGSRAGQ YSSAAGGVGP PANVPRCQVE GCQVALVNAK  180
DYHRRHKVCE MHSKAPKVIV LGLEQRFCQQ CSRFHVVSEF DEWKRSCRRR LAGHNQRRRK  240
SARDSDSRNY CQGKFPYVAS TADRALSLLS TKADAWISSD LSTRSSAALR ELIAEHRAVI  300
LARQERHLQH SNAMENFGDH SHPSSNNSFF PYDHQLQVSY EPHNWDRFND TTGTRLTLDL  360
MQAPSSAFCL LSTRGKNNKE EVEECSVLWN TWGGAHVV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	236	241	QRRRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27370.3	4e-38	SBP family protein