PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683323.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 465aa MW: 50456.2 Da PI: 8.6936

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.9	1.2e-15	287	332	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq XP_021683323.1 287 HNQSERKRRDKINQRMKTLQKLVPNS-----SKTDKASMLDEVIEYLKQLQ 332 9**********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MSQCVPSWDL DEYPSPAKQS LRSNSNSTAP DVPMLHYEVA ELTWENGQLA MHGLGPPRVP 60 VKPMASTSPS KYNSWDKPRA NGTLESIVNQ ATRLPQRKPG LQTSGCGEEL VPWFEHNRAA 120 APAASSTMTM DAMVPCSNRK NERTAHVMGN CVVGSTTPMG SCSGPAATQD EEALPNGKRP 180 RVARVPVAPE WSSRQSVSGS ATFGRDSQHV TLDTCERDLG GGFTSTSFGS QEHTSCCKTG 240 TKTATVDEND SVCHSRPQRE AGDEEEKKKG NRKSSVSTKR SRAAAIHNQS ERKRRDKINQ 300 RMKTLQKLVP NSSKTDKASM LDEVIEYLKQ LQAQVQMMSR MTMQPLILPM AMQQQLQMSM 360 MAPMNMGMGV GMGMAGVNVM DMNSVARPNI AGLSSVLPPT AFVPMTSWDG SGDRLQSAPS 420 GTVMPDPLSA FLACQSQPMP IDAYSRMVAI YQQLQQQPPA SSSKS

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MSQCVPSWDL DEYPSPAKQS LRSNSNSTAP DVPMLHYEVA ELTWENGQLA MHGLGPPRVP  60
VKPMASTSPS KYNSWDKPRA NGTLESIVNQ ATRLPQRKPG LQTSGCGEEL VPWFEHNRAA  120
APAASSTMTM DAMVPCSNRK NERTAHVMGN CVVGSTTPMG SCSGPAATQD EEALPNGKRP  180
RVARVPVAPE WSSRQSVSGS ATFGRDSQHV TLDTCERDLG GGFTSTSFGS QEHTSCCKTG  240
TKTATVDEND SVCHSRPQRE AGDEEEKKKG NRKSSVSTKR SRAAAIHNQS ERKRRDKINQ  300
RMKTLQKLVP NSSKTDKASM LDEVIEYLKQ LQAQVQMMSR MTMQPLILPM AMQQQLQMSM  360
MAPMNMGMGV GMGMAGVNVM DMNSVARPNI AGLSSVLPPT AFVPMTSWDG SGDRLQSAPS  420
GTVMPDPLSA FLACQSQPMP IDAYSRMVAI YQQLQQQPPA SSSKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	291	296	ERKRRD
2	292	297	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-107	bHLH family protein