PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021683246.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 821aa    MW: 91818.2 Da    PI: 6.4798
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021683246.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.72.2e-23127228199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_021683246.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 217
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_021683246.1 218 KNQLLLGIRRA 228
                     9999****997 PP
2Auxin_resp119.92e-39253336183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+v+YnPras+seFv++++k++ka+  ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_021683246.1 253 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 336
                     79********************************87599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 821 aa     Download sequence    
MKLSTSGLGQ QGHEGEKKCL NSELWHACAG PLVSLPTMGS RVVYFPQGHS EQVAATTNKE  60
VDGHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLTPQEQKDT FLPMELGMPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHDVEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRATR PQTVMPSSVL  240
SSDSMHIGLL AAAAHAAATN SCFTVFYNPR ASPSEFVIPL SKYVKAVFHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDPVRWPNS HWRSVKVGWD ESTASERQPR VSLWEIEPLT  360
TFPMYPSLFP LRLRRPWHPG PSSLHDNRDE AGNGLMWLRG GTSEQGLHSL NFQAVNMLPW  420
TQPRLDPALL GNDQNQWYQA MLATGLQNLG SGDPLRQQFM QFQQPFQYLQ QSSNHYPLLQ  480
LQQQHQAIQQ SASHNMLQAQ NQISTESLPR HLLQQQLNNQ PDDQAQQQHN YHDALQIQGE  540
QLKRQQSNVP SPSFLKTDFM DSSNKFTAST TPIQNMLGSL CAEGSGNLLD FTRTGHSTLT  600
TLTEQLPQQS WVSKYAPSQV NAFTNSVSLT RPYPEKDHAM ESENCNMDAQ NATNFGVNID  660
SSGLLLPTTL PRYATSAVDT DVSSMPLGDS GFQSSIYGGV QDSSELLPSA GQVDPPTPSR  720
TFVKVYKSGS VGRSLDISRF SSYHELREEL AQMFGIEGKL ENPHRSGWQL VFVDRENDVL  780
LLGDDPWEAF VNNVWYIKIL SPGDVQKMGE QGVESFGPNV G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein